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The map label for this gene is ybgC [H]

Identifier: 170747183

GI number: 170747183

Start: 793722

End: 794174

Strand: Reverse

Name: ybgC [H]

Synonym: Mrad2831_0749

Alternate gene names: 170747183

Gene position: 794174-793722 (Counterclockwise)

Preceding gene: 170747184

Following gene: 170747181

Centisome position: 13.07

GC content: 74.61

Gene sequence:

>453_bases
ATGAGCGCGATCGAGCCCGGCACCGACGGACCTTCGGAGGATGGCCCCCCACCGCACCGGCTGGGCGTGCGCGTCTACTA
CGAGGACACCGACTTCTCGGGCTTCGTCTACCACGCCAGCTACCTGCGCTTCCTCGAGCGCGGCCGCACGGAGCTGCTGC
GGGCGCTCGCCGGCGACCAGTCGGACCTGCACCGCGACGCGCGCGGCCTCGTCTTCGTGGTGCGGCGGATGAGTCTCGAT
TTCCTCCGCCCGGCCAGGATGGACGACCTGCTGACCGTCGTCACCCGCACGCGCGCCCTGCGCGGGGCCTCGATGCAGCT
CGCCCAGGAGGTGCGGCGGGCCGACGCGGTGCTGGTCGCCGCGGAGGTCACGGTCGCCTGCGTGCGCGACGGCCGCGCCG
TTCGCCTTCCCGACGCGCTGCGGCGGCGGCTCGCACCGGGCGACGCCGCCTAG

Upstream 100 bases:

>100_bases
TCGGCGGCTGAACCGCGCGCACCGCGTGATCCCGCGAGGGCCGCCCCAGGGCGGCCCTCGTCGTGTTGCGCCCCTGCGCC
GCCCGTCGCTAAAGGGGCGC

Downstream 100 bases:

>100_bases
GCACCGGCCGGCGGTCAGCCGGCCCGCGACGGGTCGGCCTCGCAGAGGACCCGGGCGAAGGCGTTGACGATCGTCAGGGC
GTCGTACTCGACCGAGACCA

Product: tol-pal system-associated acyl-CoA thioesterase

Products: NA

Alternate protein names: Acyl-CoA thioesterase [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSAIEPGTDGPSEDGPPPHRLGVRVYYEDTDFSGFVYHASYLRFLERGRTELLRALAGDQSDLHRDARGLVFVVRRMSLD
FLRPARMDDLLTVVTRTRALRGASMQLAQEVRRADAVLVAAEVTVACVRDGRAVRLPDALRRRLAPGDAA

Sequences:

>Translated_150_residues
MSAIEPGTDGPSEDGPPPHRLGVRVYYEDTDFSGFVYHASYLRFLERGRTELLRALAGDQSDLHRDARGLVFVVRRMSLD
FLRPARMDDLLTVVTRTRALRGASMQLAQEVRRADAVLVAAEVTVACVRDGRAVRLPDALRRRLAPGDAA
>Mature_149_residues
SAIEPGTDGPSEDGPPPHRLGVRVYYEDTDFSGFVYHASYLRFLERGRTELLRALAGDQSDLHRDARGLVFVVRRMSLDF
LRPARMDDLLTVVTRTRALRGASMQLAQEVRRADAVLVAAEVTVACVRDGRAVRLPDALRRRLAPGDAA

Specific function: Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond [H]

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=110, Percent_Identity=47.2727272727273, Blast_Score=97, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16647; Mature: 16516

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAIEPGTDGPSEDGPPPHRLGVRVYYEDTDFSGFVYHASYLRFLERGRTELLRALAGDQ
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
SDLHRDARGLVFVVRRMSLDFLRPARMDDLLTVVTRTRALRGASMQLAQEVRRADAVLVA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AEVTVACVRDGRAVRLPDALRRRLAPGDAA
HHHHHHHHCCCCEEECCHHHHHHCCCCCCC
>Mature Secondary Structure 
SAIEPGTDGPSEDGPPPHRLGVRVYYEDTDFSGFVYHASYLRFLERGRTELLRALAGDQ
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
SDLHRDARGLVFVVRRMSLDFLRPARMDDLLTVVTRTRALRGASMQLAQEVRRADAVLVA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AEVTVACVRDGRAVRLPDALRRRLAPGDAA
HHHHHHHHCCCCEEECCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]