Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170728439

GI number:

Start: 4998925

End: 5001036

Strand: Direct

Name: Not Available

Synonym: Swoo_4114

Alternate gene names: NA

Gene position: NA

Preceding gene: 170728438

Following gene: 170728442

Centisome position: NA

GC content: NA

Gene sequence:

>2112_bases
ATGAAAACAATATACTACCCCATACTTTTTAGCATAAGCATGATGCCTATTGGTATGCTTTGGGCGAACGCTGAAGAAAC
AGAAGAAAACATAGACATTCAAGGTATTGAGGTCATTCAAGTTACAGCCCGTAAACGCACTGAGTCACTGCAAGAGATCC
CCGATGCAGTCACCGCCTTCAGTGAGTCAGATATCGAATCTGCCCGCATTGAACAAGTTAACGATTTCATCAATCTAACA
CCCAATGTGATCTTCCGAAAAACCTTCAGAGCAGGAGCCTCATTTATCACCATGAGAGGAATTACCGGTACCCAACAAGG
TTTACCACCTGTTACCTACGTGGTTGATGGAGTTCAGGTCGGATCTGCTGATTTCATCAACCAAGATATGGGAGAGATTG
AACGTATTGAAGTACTGCGTGGTCCACAAGGCGCCCTTTATGGTGCAGGAGCTATGGCTGGTGCCATCAATGTGATCACA
AAAGCCCCCACAGAGGAACTTTCTGGAAAAATAAAAGCTCAGTATGCAGAGGGTAATGACAAGAGCGTCAGTGGCTATAT
AAGCGGTGGCGTTAGTGAGAACATCTTTGGCTTAGTCTCTGTTGGTGCCCGAAAATCTGATGGATTGATTGACTCATCGA
CTGGTGAGGATCTCGACTTTAATGATACCAAACGGATTAAAACCCGCTGGCAGTATCTTGGTGATGAATTTAGCGCCGAT
CTTAGATTAGGCTACGCCAGCTATGAACAGGGAGCAGTGATGCAAGATCTATTGGCAAAAGGAGAAGAGTTTGTTGATGC
TCAAAAAACCGATCTAGATGACTTTTCAGGTTCAGGACCAGAACGAAGCTTTATAGGGAAAGAGAACCAAATATTTAAAG
ACGCCTCAATCAAGCTTGATTATGACTTCGATAATATGACATTCACTTGGATTAGCTCCTACCAAGACGCAGAGCAAGAT
CTAATTGGCGATCTTGATTGGAGCTCAGCTAACATATTCTTGCAAGATTTAGTCGATAACTTCGATGTCACTAGCCATGA
AGTAAAACTGACTTCAAACAATGATTCCGATCTACGCTGGCTTGCAGGGGCTTACTATCAAAAACGTAATGGTCTCAATC
AACTACGTATCCGACTTGAGCCAACTGTAGGTGTTATCGGAGATTCAATATTCGATCAAGTCGATGTCAAAGAGGACACC
ATCAAAGCTGTATTTGCACAACTTAACTATGATATTACTGATAAATTAGAGCTGACGTTAGCCGGGCGTTATGATCAGGT
TGATTACCAAAGCACTCGTTTTAAAACACCTGAACAACAGGAGATAGTCCCACTTCCAGATGCTAATGGCCAGCTACAAG
ATACCTTAACGGAGTCTGACAGTTCTTTCCAACCAAAGGTTTCTCTCTCCTATGATATTAACAGTGATAGCATGATCTAC
GCGACCTATGCAAAAGGCTTTAGACCTGGGTTTTATAACTCAGGTAATCTTACAAAAGCCGAAACAACCCAAAATTTTGA
AGTGGGCGGAAAATCAACCTGGTGGAACAATCGTGTTCAAATAAATGGTGCAATTTTCTACATTGATTACTCCGAACAGC
AGTTATCCTTCATCATTGCGACTCCCCCATTTAGGCAAACCTCAAATATAGACCAAACAGAGATCCGCGGTTTGGAACTA
GAAACGGTTGTCATGTTAAGCGAAGATCTTAGATTTAATGCTGCATGGGGTTATACCGACTCAAAAGTAAAAGACACAGG
GCAAAGGGCACCAGCTACCCCGAAGTATACTTTGAACCTTGGGCTCAACTATCAAAAAGAGCTAGGCAGAGATTGGCTTT
TAAATACCCGTTTAGATTATCGAGCACAAGGAGATTTTTTTCTTGGAACAACGCAACAACCTTTGGAGGTTGGTGCTAAA
CAGTTCGTCAACCTGAGTGCTGCATTGGAATGGCAAGATTGGCGATTTACACTCTACGGAGAAAACATCACCGATGAGTA
CAGCACAACCAACGCCTCTTATGTTAATGGGTTACTGGGTACCGTAACAGGCATTATTCGAGCTTATACTCCTGGCCGTC
AAATTGGTGCATCTGTCGAATATAAATTCTAA

Upstream 100 bases:

>100_bases
CACCGCAAGCTCTAGCAGTTTTTGGCCCTCGCTGCTTTGGTTTAGACACTGACTATTTGCCGGTACCGACGAAATAATAG
ATTTAAAATGGAGAGATAAA

Downstream 100 bases:

>100_bases
AAGACCTTTGCTTTATCAAAAACAAGGATGTTTTTCCCTTTCTGGAAGCTAATATTGATTGCCATTATGCTTCCAGCTTT
TTATTCTTCAGGCAGGTTTT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>703_residues
MKTIYYPILFSISMMPIGMLWANAEETEENIDIQGIEVIQVTARKRTESLQEIPDAVTAFSESDIESARIEQVNDFINLT
PNVIFRKTFRAGASFITMRGITGTQQGLPPVTYVVDGVQVGSADFINQDMGEIERIEVLRGPQGALYGAGAMAGAINVIT
KAPTEELSGKIKAQYAEGNDKSVSGYISGGVSENIFGLVSVGARKSDGLIDSSTGEDLDFNDTKRIKTRWQYLGDEFSAD
LRLGYASYEQGAVMQDLLAKGEEFVDAQKTDLDDFSGSGPERSFIGKENQIFKDASIKLDYDFDNMTFTWISSYQDAEQD
LIGDLDWSSANIFLQDLVDNFDVTSHEVKLTSNNDSDLRWLAGAYYQKRNGLNQLRIRLEPTVGVIGDSIFDQVDVKEDT
IKAVFAQLNYDITDKLELTLAGRYDQVDYQSTRFKTPEQQEIVPLPDANGQLQDTLTESDSSFQPKVSLSYDINSDSMIY
ATYAKGFRPGFYNSGNLTKAETTQNFEVGGKSTWWNNRVQINGAIFYIDYSEQQLSFIIATPPFRQTSNIDQTEIRGLEL
ETVVMLSEDLRFNAAWGYTDSKVKDTGQRAPATPKYTLNLGLNYQKELGRDWLLNTRLDYRAQGDFFLGTTQQPLEVGAK
QFVNLSAALEWQDWRFTLYGENITDEYSTTNASYVNGLLGTVTGIIRAYTPGRQIGASVEYKF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA