Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170728152

GI number:

Start: 4660786

End: 4662765

Strand: Direct

Name: Not Available

Synonym: Swoo_3824

Alternate gene names: NA

Gene position: NA

Preceding gene: 170728143

Following gene: 170728154

Centisome position: NA

GC content: NA

Gene sequence:

>1980_bases
ATGCGTCTCTTGCTCCTAATATTATTTCTCTTCAGTACCTTTGGTCTCGCCGCACAACCTAACTCTACTTTTTCACGAAA
CTTAAATAGCATAGAAGAGCAACTCTACTCTCTACCTTTTAGGGCTCAAGCCCGCTTGATAGAGATGGAAGAGGTTGACT
TAAAAGAGAAGCAACCTATACCACTACTTGTTCGCTACTTTACTCTCAGGGCCAGTGCCGCCCTACAGCTCAATGAAGCT
GAGCAGGCTATCAAGGCCGCAGAAAAAGGACTTAAGTATGTAAAAGGTAAGCCTGAATTTAAAGCGGAACAATTTCAGCT
CCAACTCAGATTCATTCAAGCTCTGTTGATGCAAGGTAAAAACCAATTGGTTTTGTCACAACTGAACAGCCTGCTTGAAG
CTACCGAGTCTTTTAACGATCCGGCCACCACAGCTGAGATCCTATTAGTAAAAGCTCAGGCATATAGAGATAACGGGGAG
TATGACATCTCCATGGCTGCCATGATGAGTTCATTAGAAACGGCAAAGCAAGCCGATGATCAGGTATTACTTAAGCGTAT
CTCATCAAATTTAGGTGCAGTCTTACTGAGTCTCAATGGCTTCGATAAAGCAGAATTACTACTGGAGCAGTCTTATCTCT
TTTTCAAGCAACGAAAAATGTCCTTTAACCAGTTACTGGTAAAAATGGATATCGCAGAGCTAGCCAAGAAGCGGGGACAA
GATAAAAAAGCGATACATGAGTACCTTAAAGCACTGAATTTAGCTCAGGTATTAGGGGATGGTTTTCACCGCTTTCGCAT
CAATCTATTAATAGCAGAACTCCTGTTCGACAGGGGAGAAACTGAGCGAATGAAACAATACTTACAGGCTAGTGAAGTCT
TAAGTGAGCGAGAAAACACCCGCTACTTCATCAGCAAATTCAACCTACTTAAGGTTAACGAAAAACTTATAAATAACAAC
TACCAAGAGGCATTAGATCTCCTCTCTACACTGCTTCCCAAACTCAATAAATATAGCTCCCTCTATCGTTCAGAGCTGCA
ACTGCATTTGGCGGCCTCCAAAACGTATTATGGCTTAGGGGACTTTGAAAATGCTTACCTTACCCTACTCAATTACCAAG
AAAGCTTTAATCAATTTAGTGCTGATGAGCAGCTTGAAAATCTAGAAAGACAGAAACTACTCTATAAATTGGAGCGACTA
AAAGCTGAAAATCAGCAACTGAGCTGGAACAATGTGCTGCACACTTTAGAGCTGGAAAACAGTGAAGATGAGATTGAATA
CCTCAATATACTAATATTCTTTGCTATTGTTTCCGTAAGCTTAACCTCATTAGCGGCACTCTGGATCAATCGTCGCCGGA
TCCGCTGGGGCAAAATAGCCAATACAGACAGTCTTACCAACCTCTACAACCGACGCTATCTATCCCATAAATTACTGAGT
CTTAATAAGCCAGATAACGACGCCCCTCTATCATGCATATTGTTAGATATTGACCTTTTTAAAGTGGTTAATGATTCATA
TGGCCACATAGTCGGTGACGAAGTACTGGTTAAAGTCGCTACGCTATTTATCAATAATGTCAGAGAGAAAGATATCTGTG
CCCGAATTGGCGGTGAAGAGTTTATGATCTTACTCCCCAATACAAACTTACAGCAAGCATCAGATATCGCAGAAGATCTT
CGGCTAAAGATAGAAAGCTTACACTTTGCCTCTCTCAAAGGTGAGCCTTTCACTATCACATCTAGCTTTGGAGTCGTTGA
GGCAGGTAAAGAGCAAAGTTTCTCCGAACTATCCAATGCGGTGGATCTGTTACTTTATACCGCTAAACAAAATGGTCGCA
ATCGTGTCGAAACAGGAACGCCTAAATTTACAAACTCCCAGGAGATGGAACAGGGACATAGTAAAATGGCACAACAACTT
GCGAACTTAAAACGTAAAGCGCAACGACTACTCTTTATGCTAACTCAACTTATCAAGTAA

Upstream 100 bases:

>100_bases
GCTAAAAAGGATACAATATGCGCAGTTTGTTATGACTCAATTAGGCAATGAGCCTTAGATATACTCTTTGACTTTCCTAC
CAGCTCCACAAGGCAAAATA

Downstream 100 bases:

>100_bases
CATTTAGCTTAAATGAGCTGACTCTGCTTCTTACTTTGATGCATTTTTAGCTCAACGGTTTCAATCAGCTTTTCGGCATC
GGTTTCAGAGATCATGCCGT

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>659_residues
MRLLLLILFLFSTFGLAAQPNSTFSRNLNSIEEQLYSLPFRAQARLIEMEEVDLKEKQPIPLLVRYFTLRASAALQLNEA
EQAIKAAEKGLKYVKGKPEFKAEQFQLQLRFIQALLMQGKNQLVLSQLNSLLEATESFNDPATTAEILLVKAQAYRDNGE
YDISMAAMMSSLETAKQADDQVLLKRISSNLGAVLLSLNGFDKAELLLEQSYLFFKQRKMSFNQLLVKMDIAELAKKRGQ
DKKAIHEYLKALNLAQVLGDGFHRFRINLLIAELLFDRGETERMKQYLQASEVLSERENTRYFISKFNLLKVNEKLINNN
YQEALDLLSTLLPKLNKYSSLYRSELQLHLAASKTYYGLGDFENAYLTLLNYQESFNQFSADEQLENLERQKLLYKLERL
KAENQQLSWNNVLHTLELENSEDEIEYLNILIFFAIVSVSLTSLAALWINRRRIRWGKIANTDSLTNLYNRRYLSHKLLS
LNKPDNDAPLSCILLDIDLFKVVNDSYGHIVGDEVLVKVATLFINNVREKDICARIGGEEFMILLPNTNLQQASDIAEDL
RLKIESLHFASLKGEPFTITSSFGVVEAGKEQSFSELSNAVDLLLYTAKQNGRNRVETGTPKFTNSQEMEQGHSKMAQQL
ANLKRKAQRLLFMLTQLIK

Sequences:
NA

Specific function: NA

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA