| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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Identifier: 170727333
GI number:
Start: 3667199
End: 3669316
Strand: Direct
Name: Not Available
Synonym: Swoo_2993
Alternate gene names: NA
Gene position: NA
Preceding gene: 170727331
Following gene: 170727334
Centisome position: NA
GC content: NA
Gene sequence:
>2118_bases ATGAGTAAGCAGAAACTGATCGAATTCACACTTGTAACTGGATTAATGGCACCTTTCGCAGCAATAGGTAGCGAGGGCCC CGCTGAACGAGTTTCCACTGAGCATGCCAAGGATAACCTTGAACGCATCACAGTCACCGCGTCACGTCAGCGTACTTTAG ATACGGATCTGGCCATGTCACTACAAGGAGTCAGCACAGAAGAGTTAGCCTTAGACAGTGGACAGCATGTCGCCGAATCA CTAAACAGTATTTCAGGGGTGCTAATTGACCAACTCTCTGGCGGTCAAGGCCATAAAGCAGCAATTAGAATGCCCATGAA TACCAGCGGTTATTACTTGTATTTACAAGATAATATTCCGCTTCAGTCTCCAGCCTTCTTTAACCATAATGCCCTTTGGT GGTCCAGTTTTAATTCAAACATTGCCACAATGGAGGTCTTAAAAGGAGCTGGCACCGCCTTATATGGCTCAGGAGCCGTC GCGGCAACGGTAAATATCTTGTCTAAGGAGGTGGCTGGATCAGATCAAACAGACATGGGATTGATACTAGGACAAGATGA TTACGCTAAGGTGCAATTCAGTCACAGCAGTATACTCTCTGGTACTCAAGGCATTCGCGTGTCAGCTTCATACCTAACCA ATGACGGTTGGCGAGATCACACTGGATCAGAACGGGCTGAATTAACACTCAGGCATGAATTAGAGCTCGAAAACAATGAA CGCTTAGTCACCTCTTTAGTGATTTCAGACCTCGAACAGGAGATGGCGGGAAATTTAACTCAAGCCTTGTATGACAATGA TAAAACAAACTCGGGATTATCAGATGAGGTACTAGCCAGCGATCCATTACGCAAAACCAAATATATGCGACTGTCTAGCC ATTGGGATAAAACCACCGACAGTAGTTACTTTTCCCTCATTCCATATTATCGATACCGTACTAACGATTACACCGCAACG TGGAACAAAAACATGCCCAAAGTGGAGTCAGAGGTACACACTTTAGGCTTACTGGCACTAGCAAATTTTGAGCATGATGG CGACAGTGACACCAGTGTTGGCTTAGATATCGAATTGACTGAAGGGGATCAACTCTCCTATCAGCCCCTAGACTATACCA GCACAGGTTACAGGGCTGATACCTTCATTAAAGGGGAGAGATTTTATGATGACACCACTCAATACTTGAGTCTTTCTCCC TATATTCAGCACAAGCGGGAGTTAACAGAAAACCTCGATTTAACCTTAGGCGCCAGATATGACTATGGTCAATATGATTT TAATAACCACTTAGGTGTTTATGGTGACATTGGCCATGGGAAGCGCAGTGTTGAAGACAGAACAGATAACTTTAACCATA TTAGTCCTAAGGCAAGTTTAAACTATCATTTGAGTCAAGATAGCAGCCTCTATCTACGCTACGCCAACAGTTTCCGCTTA CCAACAGCCAGTAGTCTGTATCATTTGACCATCAAAGATGATGGCAATGCCGAAGCGGTCGATCCTGAGATTTCAGATAC CTATGAACTTGGGTTTAAAGCCAATTGGCAGTCAATATCCCTCGACACAGCTGTTTATTATATGGATGTAGACGACGGTA TTGTGCGGGCTTATAACGATGCAGGCCAGCGCTATTTAACCAATGCAGCCCGTGTTATTCATCAAGGAGTTGAAGTCTCT GTGGCCTGGAAGATTAATGAACAGCTAAATCTCAGTACAGCTTACAGCAGATCTCACCATGAATTTGATCAACATGAAGC ATACTCAGGTAATGAAATGGCGGCTGCACCAGAGCATATCGCTAACGTGCGATTACGTTATAAGCCCGAGTTTATACAGG GCTTAACTAGCATGCTAGAGATCCAATCCGTAGGAGAATACTGGTTAGACGATGCGAACAGTCAAGATGATGAGGGAATC GATCGTATTGAAGATGGCTACACCATCGCCAATATCAAAGCCCTTTATCAATTCTCTAAGCAGCTATCTTTCAATGCCAG AGTACTGAATATCACCGATGAGGAGTATGCACAGGAAGCCTCATACCGATACAACAAAACATTTTACTCTCCAGGCGCAC CTAGAACCGCCTACATTGGCGTAAACTATCAATGGTAA
Upstream 100 bases:
>100_bases GAAAAACAAAAAACCTAAATAAATCAAAAGATTGACTTGTGGCATACAAAGTGCTTTTACCTAGCACGACTTAAACCACA TCATCCCACTAAGAGGTAAT
Downstream 100 bases:
>100_bases AACTCCCCATGATTAAAGTTAATCACTTAATAGTATTGCTAATTATCTGCATCCCCTTGAAGTTCACCGACGTTAAAGCA GCTCATGAACATCACAAGAT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>705_residues MSKQKLIEFTLVTGLMAPFAAIGSEGPAERVSTEHAKDNLERITVTASRQRTLDTDLAMSLQGVSTEELALDSGQHVAES LNSISGVLIDQLSGGQGHKAAIRMPMNTSGYYLYLQDNIPLQSPAFFNHNALWWSSFNSNIATMEVLKGAGTALYGSGAV AATVNILSKEVAGSDQTDMGLILGQDDYAKVQFSHSSILSGTQGIRVSASYLTNDGWRDHTGSERAELTLRHELELENNE RLVTSLVISDLEQEMAGNLTQALYDNDKTNSGLSDEVLASDPLRKTKYMRLSSHWDKTTDSSYFSLIPYYRYRTNDYTAT WNKNMPKVESEVHTLGLLALANFEHDGDSDTSVGLDIELTEGDQLSYQPLDYTSTGYRADTFIKGERFYDDTTQYLSLSP YIQHKRELTENLDLTLGARYDYGQYDFNNHLGVYGDIGHGKRSVEDRTDNFNHISPKASLNYHLSQDSSLYLRYANSFRL PTASSLYHLTIKDDGNAEAVDPEISDTYELGFKANWQSISLDTAVYYMDVDDGIVRAYNDAGQRYLTNAARVIHQGVEVS VAWKINEQLNLSTAYSRSHHEFDQHEAYSGNEMAAAPEHIANVRLRYKPEFIQGLTSMLEIQSVGEYWLDDANSQDDEGI DRIEDGYTIANIKALYQFSKQLSFNARVLNITDEEYAQEASYRYNKTFYSPGAPRTAYIGVNYQW
Sequences:
NA
Specific function: NA
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA