Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 170727301

GI number:

Start: 3626284

End: 3629097

Strand: Direct

Name: Not Available

Synonym: Swoo_2959

Alternate gene names: NA

Gene position: NA

Preceding gene: 170727297

Following gene: 170727303

Centisome position: NA

GC content: NA

Gene sequence:

>2814_bases
ATGCAACGAAGAAAATTGCTTCCTATTAGGGGAAGTCATGTAAAAAGAATAGGCGAACAAGATCCAAATAGAACAGGGAT
CATTGTGGATAATTACCCAGAAACATCATCGGTAAAAGTACATTGGGTTCATGATAAGACAGAGTCTGTTCAAACTGTCG
ATGCTCTAGTAAATGGATTTAGGTTAGGTACTGGTGTTATCGCTCCCACCACTTCAGATGGCAGGAAGTTAGGCGAAGGC
CAACTGACCCAATACCGAAAGATTGCTGGACAAGAACTTTTACTCGTTGAGTTTCATGAAAGCAATGAAAAACGCTGGCT
CCCTTACCAATTATTAAGCCAGGCAAAAGACGTAAAACACGAATTAGTCACCTTAAAACACTCTGCTGCAGAGAAAGTAA
GGTTAAAGACGTTAGCTCACGCCATTACTATTTGGAATGAAAATACTGGTGCGCTTTCAAATTTAAATATCGATCCACTG
CCCCACCAAATTCACCTCGTTCATCATATTCTAAATTCTGGCAATTTAAATTGGCTAATCGCTGACGATGTTGGTCTTGG
TAAAACAGTTGAAACCATCTTATTAATGAGTGCATTGCAGCACCGAAAACAACTAAAAAGTGTTTTACTCATTACCCCAG
CTGGACTAACTCAACAGTGGCAAGAGGAAATTATTGAAAAGGCGCCTAACTTACCGCGCTTTAATGTTTATGGCACAGAT
TTTCCGACCAAACATGAACACCATTGGTTTAAAAATGACTTTGTTGTTGCATCTATGGACCGTTTGAAAAACAAAGACCA
CCTAAATATTTTACTTGATAGTCGTCAATATGACTTAATCATTGTCGATGAAGCGCATCGCCTATCTCGACGCCAATATG
GCTACAAACTCGATAGCTCGGAAAGGTTTGAATTAGTTGCCGAGTTACGTAAACAAAATCAAAATGGCAATTTAATCCTC
CTTACTGCGACCCCACATCAAGGTATGCAAGACAAGTTTATTGCGCTCCTTGAGCTACTTAGACCTGAACGAAAGAGTGA
TCTTTTAAAAATAGATGTTAACCCTGAAGTTTTGAGTGAATTTGTATTTCGTAACTATAAGGCCGACGTAACGGATCTTG
ATGGTAACTTTGTATTCCACGGTAAAACCACTCGGTCAGTTCAAGTTCAAACGAATGAGCAGGCAATTGAATTTGATAGC
TCACTAAGAAAATATCTAAAGCGCGGGTACTCTGCTTCCAAGGCTCTTGGGAGAGAAGGAAATGCTATTGGCTTTGTTAT
GACTGTGTATCGTAAGCTTGCTGCTTCAAGTGTGGCAGCAATCCATAAAGCACTACTTAACCGCTTAGATCGACTCCAAA
ACCAACTATCCTCATTGGATTCTGTTGATATTGATGAAGATAGCCCTTTTCAAGGTGAACAAGAGGAGTCATTGGCACAA
AAATCTTCTGAAAAAGAATTTTTTAGTGGTGAAATTGGCTTACTAAAAGAGTTGATTATTGATGCAACTAACTTACTTGA
GCATGACAATAAGTCTAAACAGTTTATCGATACTATTATCACAAAAATCTTAAAGAATAATCCGAAGGAAAAGGTACTAA
TATTTACAGAGTATCGCTCTACACAACAATATTTAGCTAAAACCCTACAACAGAAAATAGGCGCTGATAGCGTCAATTTA
ATTTATGGTGGAATGAAGCTAGATGAACGAAAACAACAAATTTATGACTTTGAAAATACAGGTCAATTCTTAATATCAAC
AGAAGCTGGCGGTGAAGGTATTAACCTACAAGAGCATTGCCATATCATGATCAACTATGACTTACCATGGAACCCTATGA
GGTTGGTTCAAAGAGTTGGCCGTCTATATCGCTACGGACAACTGAAGCGAGTTGTAGTATTTAATATTAACTCGTCAGAC
TCATTGGATGAAAAAGTACTCGAAACTATGTATGGGCGTGTTGAGGCGGTAGTAAAAGACTTAGCTCAAGTTCAGTCTTC
AGAGTTTAACGATGCACTAATGGATGACATTTTAGGCGAAGTATCTAGCTTAATTGATATCGAATCTATTCTAGAAAACG
CCCAATCAGAAGCCATTGAACGAACAAACCAAAGGATCAATGAAGCGGTAGAAAAAGCCAAAGAGTCGGCCGAACTTCAG
CGTGATCTTTTCCAACATGCGATCAATTCAAATGATGTCCGCAATGACAACCCGATAAATATTAACAAACAACATGTTGC
TGCTTTCATATCTGGGATCTGTGAATTACTTGATATTGAAATTATGAGTAAGCTACACAACGATGAAGTATGGCAATTAA
GAATACCGCCCAATGTGATGGAACTGCTACAAACGAAAAGAAGCAGACACGATATTAGCTTTGATAGAAAAATTGCGTCA
ACCAGAGCTAATACCCAATATATTGATGTTGACTCTTATTTGATGAAGTTATTTTTATCACACGCTATGAATTATAACTT
TAAAGGCAAAGCTGCGCACTTACACGCAGAACAACTTGCTGCAAGCGCATTTATGGCGTGTATCTTAACCTGGCAAAACA
GTGTGGGAATTAGAAAGCGGCAAGATTTTACGATTTTGAGTATGGAAAATGGGGAAATCGTAGAGAATACGGAGGAAATA
TTAAACTGGTTACTTCTCCCCGCGAATGACGCAGAAAATAAGCCACACTCTATTGATAAGAGACGACTTTTTCAATTAAC
CCAAGCTTTTGCTGAAAAAAAATTAGCGGTTAACATTAACCTGCATACTTTTCCAGAGAAAGTGCACTGGGTAAGCGCTG
CAGTAATCAATTAG

Upstream 100 bases:

>100_bases
ATGGTTTCAATGAGTCAAGTGTTGGCTTAACTCGTTATCTAGCTTATTAGCTCTGATTGCTGTCAAAGCCATTATTATAG
AATTAGTATAGGACCTACAA

Downstream 100 bases:

>100_bases
TTTATCTTTCAAGAGAGGTCGGCTAAGTGCAATAACTGGTAGAGCTTATCTAATGTGGTACAGCTAAGCTCTATCATCAA
CTTACAGACGCCAACTTTGA

Product: helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>937_residues
MQRRKLLPIRGSHVKRIGEQDPNRTGIIVDNYPETSSVKVHWVHDKTESVQTVDALVNGFRLGTGVIAPTTSDGRKLGEG
QLTQYRKIAGQELLLVEFHESNEKRWLPYQLLSQAKDVKHELVTLKHSAAEKVRLKTLAHAITIWNENTGALSNLNIDPL
PHQIHLVHHILNSGNLNWLIADDVGLGKTVETILLMSALQHRKQLKSVLLITPAGLTQQWQEEIIEKAPNLPRFNVYGTD
FPTKHEHHWFKNDFVVASMDRLKNKDHLNILLDSRQYDLIIVDEAHRLSRRQYGYKLDSSERFELVAELRKQNQNGNLIL
LTATPHQGMQDKFIALLELLRPERKSDLLKIDVNPEVLSEFVFRNYKADVTDLDGNFVFHGKTTRSVQVQTNEQAIEFDS
SLRKYLKRGYSASKALGREGNAIGFVMTVYRKLAASSVAAIHKALLNRLDRLQNQLSSLDSVDIDEDSPFQGEQEESLAQ
KSSEKEFFSGEIGLLKELIIDATNLLEHDNKSKQFIDTIITKILKNNPKEKVLIFTEYRSTQQYLAKTLQQKIGADSVNL
IYGGMKLDERKQQIYDFENTGQFLISTEAGGEGINLQEHCHIMINYDLPWNPMRLVQRVGRLYRYGQLKRVVVFNINSSD
SLDEKVLETMYGRVEAVVKDLAQVQSSEFNDALMDDILGEVSSLIDIESILENAQSEAIERTNQRINEAVEKAKESAELQ
RDLFQHAINSNDVRNDNPININKQHVAAFISGICELLDIEIMSKLHNDEVWQLRIPPNVMELLQTKRSRHDISFDRKIAS
TRANTQYIDVDSYLMKLFLSHAMNYNFKGKAAHLHAEQLAASAFMACILTWQNSVGIRKRQDFTILSMENGEIVENTEEI
LNWLLLPANDAENKPHSIDKRRLFQLTQAFAEKKLAVNINLHTFPEKVHWVSAAVIN

Sequences:
NA

Specific function: NA

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA