Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170727278

GI number:

Start: 3592665

End: 3594617

Strand: Direct

Name: Not Available

Synonym: Swoo_2936

Alternate gene names: NA

Gene position: NA

Preceding gene: 170727277

Following gene: 170727283

Centisome position: NA

GC content: NA

Gene sequence:

>1953_bases
ATGAGAAATTCAGTGATAGACCAGCACATCTCAAACGTATACAGCTCTATTGAAAACAAGGGTATAGAGAAGAATGTCGT
TATTAATTCCTGGAAACGATGTATTGAAACCTTCAAGCTTGACCCTCTGAGTCGCCAGCCTTCCCGCGTATTAACCCATT
CCGAGCTACAGAATCATACCTATCCTATTGAAGAATTTATCACTACCGCACGGGAGGGGATGAAAACGCTTTATGCACAA
GTACAAGCACTCGACTATGTGGTATTACTTTGTGATAGAAAAGGAGTCACTGTCGATTATATTGGTAATGATAGACTGAA
CAAAGAACTTAGAAACTCAGGGCTTTACCTAGGTGCAGACTGGAATGAAAGGCATGCAGGAACCTGCGCAGTAGGAACAT
TAATCAACGAACATGAGCCGATGACGATACATCAACAAGATCATTTTGACATTGTGAACACAACATTAACTTGCTCTGCT
TCGCCAATTTTAGATCACGATGGTCAGTTACTGGCTGTATTAGATGTGTCTGCACTGCACTCGCCAAAAGAGAAAAGTAG
CCAACATTTACTGCTAAAGTTAGTGCAAATGCATGCTAGATTTATCGAGTCAGCACATTTCCTTAATTACTATCGCGAAC
ACACCATTTTAAAGTTTGATTTCAATGTCTGTACGTTATCAACTAATTGCCCTAACCTAATCGCATTAGATAACCACAAC
GTCATTGTTGGTGCCAATCAAAATGCACGAAAAATCATGGCACGTGAACTTGGCATTAAAGATATCACCTCTCAACTGTT
AACTGGATTTGAATTTACTTCACTGTTTGAACTAAGTAAAAGCAAAAACACCGCTTCATTTGACTACTATTTATTTATAT
CTAGAAATACGGGACTTTCATTTTTCTGTGACATTCAAACACCTAAAACAAAGAGTAAAAGGCTGTTTAATCCAGTACAA
AATACCACTCATGAGCCTGTAAATATCGTAGCAGAGATAGATAAGCTTGCAGGTCATGACCCTTCCATGTCTAAAGTCAA
ACAGCTGGCCAACAAATTTGCTCCCACAGACATTAATATTTTAATTAGAGGAGAAACCGGCACAGGTAAAGAAGTACTTG
CTAAAGCCATTCATGACAGCAGTAAACGCAGTGATGGGCCTTTTATTGCCGTGAACTGCGCAGCTTTACCTGATAGTTTG
ATTGAAAGCGAGCTGTTTGGTTATAAATCAGGCAGTTTCACAGGTGCAAACAGTAAAGGTAAATCAGGGCTTATTCTCGC
GGCAGATCAAGGCACACTTTTCTTGGATGAAATCGGCGATATGCCCTCCTCCTTACAAACTAGGCTGCTGAGGGTTTTGG
CCGAAAAAGAGGTCACTCCTGTAGGCTCAGACAAACCCATCAAGGTCAATTTTCGGCTCATCAGTGCCACTCATCAAGAA
GTTGCACCACAAAATGCGCCGAATAAAAACGATTTTAGAGCAGATTTATACCACCGCCTTAATGGCGCAACCATCAACTT
GCCGCCACTGCGTGACCGACAGGATATCTATTATCTTATCTCCAAGTTGATAGGCAAAGAATCAAATGTGAACTTGTCTA
AATCCAGTTTAGAGGTGCTCACTGAGTACGCTTGGCCGGGCAACATTCGCGAGTTAAAGAATGTGATTAACTATGCCTGC
ACCCTGTGTGATGGAAAAGGGATACGATCAGAACATTTACCTGATTACGTCTTTATCCGTGATCCATTTATCGTTAACAA
ACACAGTCACTCTCCTATAAGGCATCTCGAAACGTTATCCGAAGAGGGACAAGAGTTGTTACTAACGCTGAGAAATAATA
ATTGGAATGCGACGGCTTCAGCCAAAAAACTCAACATTGGACGAGCTACACTGTATAGAAAAATGAAAAAATTCAACATT
ATATCTCCCAACAATACTGACCTAACTTACTAG

Upstream 100 bases:

>100_bases
ACTAGACTGGGATAGTGATATATGCTAATCCTAGCTAAATTAACAATTATCTAACAGAAGACATATGGAAGTGAATAAAA
TATAAAGTTAAGGTTTGGAC

Downstream 100 bases:

>100_bases
CATTCACATTATCACAATAACGAGAAATACATTCTAATGGGTAAAATACTCAACTCTATCCCATCGCAGTTCTATCTTTA
TGGTCTAAACAGGGACACAA

Product: Fis family GAF modulated sigma54 specific transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>650_residues
MRNSVIDQHISNVYSSIENKGIEKNVVINSWKRCIETFKLDPLSRQPSRVLTHSELQNHTYPIEEFITTAREGMKTLYAQ
VQALDYVVLLCDRKGVTVDYIGNDRLNKELRNSGLYLGADWNERHAGTCAVGTLINEHEPMTIHQQDHFDIVNTTLTCSA
SPILDHDGQLLAVLDVSALHSPKEKSSQHLLLKLVQMHARFIESAHFLNYYREHTILKFDFNVCTLSTNCPNLIALDNHN
VIVGANQNARKIMARELGIKDITSQLLTGFEFTSLFELSKSKNTASFDYYLFISRNTGLSFFCDIQTPKTKSKRLFNPVQ
NTTHEPVNIVAEIDKLAGHDPSMSKVKQLANKFAPTDINILIRGETGTGKEVLAKAIHDSSKRSDGPFIAVNCAALPDSL
IESELFGYKSGSFTGANSKGKSGLILAADQGTLFLDEIGDMPSSLQTRLLRVLAEKEVTPVGSDKPIKVNFRLISATHQE
VAPQNAPNKNDFRADLYHRLNGATINLPPLRDRQDIYYLISKLIGKESNVNLSKSSLEVLTEYAWPGNIRELKNVINYAC
TLCDGKGIRSEHLPDYVFIRDPFIVNKHSHSPIRHLETLSEEGQELLLTLRNNNWNATASAKKLNIGRATLYRKMKKFNI
ISPNNTDLTY

Sequences:
NA

Specific function: NA

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA