Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170726156

GI number:

Start: 2228583

End: 2231303

Strand: Direct

Name: Not Available

Synonym: Swoo_1803

Alternate gene names: NA

Gene position: NA

Preceding gene: 170726154

Following gene: 170726158

Centisome position: NA

GC content: NA

Gene sequence:

>2721_bases
ATGGAGCCAATTTACAAATTTTTGAGACTTTTTGGCGCAGATCATTCTATGGGTAAATCGCTAGTTATTGTCGAATCACC
GGCCAAAGCCAAGACTATTAATAAATATCTCGGCAAAGATTACATCGTGAAATCGAGTGTGGGTCATATTCGTGACCTAC
CAACATCCTCCACTGCTGAAGCGAACGTGGCGACTAAAACGCCTGCTGAAGTCAGGAAGATGTCTCCTGAAGAGAAAGCT
ATATATAAGAGTAAAAGAGCGAAACAGGCGCTAGTTACTCGTATGGGGGTTGATCCTGAAAATGGCTGGAAGGCCAAGTA
CCAGACTCTTCCCGGTAAAGAGAAAGTGGTTAAAGAGTTGCAAGCATTAGCTGCAAGTGCTGACCATATCTTTCTCGCAA
CCGATTTGGATAGAGAGGGAGAGGCTATTGCCTGGCATCTTCAAGAGGTGATTGGTGGAGACGCATCTCGTTATCAACGA
GTCGTGTTCAACGAGATCACTAAATCCGCTATCCAAGATGCTTTTAGTAAACCTGCCACACTTGATACGAATATGGTGAA
TGCGCAACAAGCGCGCCGTTTCCTTGATCGTGTCGTTGGTTTTATGGTTTCTCCTCTGCTTTGGAAAAAAGTGGCGAGAG
GACTTTCGGCTGGTCGTGTTCAGTCGGTTGCGACTCGTCTAGTGGTTGAGAAAGAGGGTGAGATTAAAGCTTTTGTTCCT
GAGGAGTTTTGGGATATACACGCCAATTTAACAACGCTTGCAAATGACGCGTTGAAGATGGAAGTGGTTAAGTTCCAGGA
AAAAGCGTTTAACCCAGTTAATGAGCTGCAAGCTCAAACGGCTGTGAGTGCTTTATCACAGTCAAGCTTTGTGGTTGCAG
CTCGTGAAGATAGGGCAACGTCTAGTAAACCTTCAGCGCCTTATATCACATCGACATTGCAGCAGGCTGCAAGTACCCGT
TTAGGTTTTGGTGTAAAGAAAACCATGATGATGGCTCAACGTCTTTATGAGGCGGGTCATATTACCTATATGCGTACAGA
TTCAACCAACTTGAGTCAGGAAGCGGTAGACAATGTCCGTGAAATGATTGGCAAAGAGTACGGCGATAAATATCTGCCTG
ATGCGCCAATCCGTTACGGAAGCAAAGAGGGAGCGCAAGAGGCACACGAAGCTATTCGTCCTTCAGATGTATCCGTTCAT
GCCGCTGGTATGAAAGATATGGAGCGTGACGCGCAGCGACTTTATGAGTTGATCTGGCGTCAGTTTGTTTCTTGCCAGAT
GACACCTGCTAAATATGATGCGACTCGTTTAACTGTCAAAGCGGGTGAATATGAGCTTAAAGCAACGGGTCGAACACTAC
GTTTTGATGGTTGGACACGAGTTCAAACAGCCGTTAAAAAGAAAAATGAAGAGGATAATACCCTGCCAGTCGTGGCTAAA
GGTGATGTACTCTCTTTAGAGGAGTTACTGCCTAAGCAGCACTTTACTAAGCCGCCTGCTAGATACAGTGAGGCTTCATT
AGTTAAAGAGTTAGAAAAGCGCGGTATTGGCCGTCCATCTACCTACGCAACGATTATCTCAACCATACAAGACCGTGGTT
ATGTAAAAGTTGAAAATCGCCGTTTCTATGCTGAAAAGATGGGTGAGATTGTCAGTGAAAGTTTGATTGGCAGCTTTAAA
GAGCTGATGAGCTACGACTTTACTGCCAGCATGGAGCAGACCCTTGATGATGTGGCACAGGGTGAGCTCGAGTGGAAAAA
AGTGCTTGATGGTTTTTATCAAGACTTGACCAAACAGCTTGATCAAGCAGAGCTTGCACCGGAAGAGGGCGGAATGCGCC
CGAATGAGATGGTGCTTACAGACATCAAGTGTCCGACTTGTGGCAGACCTATGGGGATCCGAACTGGTACCACAGGGGTG
TTCCTTGGTTGTTCAGGTTATGCGTTGCCGCCTAAAGAGCGCTGCAAAACCACCATGAACCTAACCGCAGGTGAAGAAGC
GGTCAGTGAAAATAGTGAAGATGCAGAAACCGATGCGTTACGTGCTAAACATCGCTGTGGCGTCTGTGGTACAGCCATGG
ACAGTTATTTAATTGATGAAACTCGTAAGCTTCATGTATGTGGTAATAATCCAATCTGTGGTGGCTATGAGGTTGAGTTA
GGTCAATTTAAGATCAAGGGCTATGAGGGACCCATCATTGAGTGCGATCGTTGCAGTAATGATATGGAGTTGAAAAATGG
TCGCTTTGGTAAGTACTTTGGTTGTACTAACTCTGAATGTAAGAATACTCGTAAGCTGCTAAAGAGTGGTGAAGCTGCGC
CGCCAAAGGAAGATCCTATTCATCTTCCTGAGTTAAAATGTACTAAGTCAGATGGCTACTTCGTATTAAGAGATGGTGCT
GCCGGTATCTTTATGGCTGCAAGTACCTTCCCTAAATCACGTGAGACTCGTCCGCCATTAGTTGAAGAACTAGTGAAGTA
CCGTGAGCTATTATGGCCTAAATATGCTTATTTAGCCGATGCTCCGGTTGAAGATGATGATGGTAACAAGTCTACGGTGC
GCTTTAGTCGCAAGACCAAGGAGCAGTACGTTGCAACAGAGGTTGATGGAAAAGCGACTGGCTGGACATCAAAATTTGTT
GATGGCAAATGGGTGACTGAATCTAAAAAGAAAGCCAAGCCTAAAGCGAAACCTAAAGCTAAGGCGAAAGCCAAGAGCTA
A

Upstream 100 bases:

>100_bases
AAAAAATATTTTACATTTTGTCTATGTATGCTTAAAAATTGGCTTAACGATACAAATAAAAGAGGGATTAACTTGAAACT
ATCGAGACAACACTCTATAT

Downstream 100 bases:

>100_bases
TAGAGGGGGAACACTCCTATTTTAGCCCTATAAAGCCTCGATAGTTTTCGGGGCTTTTTTATGTCCTTTACTTCAGTCCT
TAGTATACCAACTAACCTCT

Product: DNA topoisomerase I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>906_residues
MEPIYKFLRLFGADHSMGKSLVIVESPAKAKTINKYLGKDYIVKSSVGHIRDLPTSSTAEANVATKTPAEVRKMSPEEKA
IYKSKRAKQALVTRMGVDPENGWKAKYQTLPGKEKVVKELQALAASADHIFLATDLDREGEAIAWHLQEVIGGDASRYQR
VVFNEITKSAIQDAFSKPATLDTNMVNAQQARRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVATRLVVEKEGEIKAFVP
EEFWDIHANLTTLANDALKMEVVKFQEKAFNPVNELQAQTAVSALSQSSFVVAAREDRATSSKPSAPYITSTLQQAASTR
LGFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQEAVDNVREMIGKEYGDKYLPDAPIRYGSKEGAQEAHEAIRPSDVSVH
AAGMKDMERDAQRLYELIWRQFVSCQMTPAKYDATRLTVKAGEYELKATGRTLRFDGWTRVQTAVKKKNEEDNTLPVVAK
GDVLSLEELLPKQHFTKPPARYSEASLVKELEKRGIGRPSTYATIISTIQDRGYVKVENRRFYAEKMGEIVSESLIGSFK
ELMSYDFTASMEQTLDDVAQGELEWKKVLDGFYQDLTKQLDQAELAPEEGGMRPNEMVLTDIKCPTCGRPMGIRTGTTGV
FLGCSGYALPPKERCKTTMNLTAGEEAVSENSEDAETDALRAKHRCGVCGTAMDSYLIDETRKLHVCGNNPICGGYEVEL
GQFKIKGYEGPIIECDRCSNDMELKNGRFGKYFGCTNSECKNTRKLLKSGEAAPPKEDPIHLPELKCTKSDGYFVLRDGA
AGIFMAASTFPKSRETRPPLVEELVKYRELLWPKYAYLADAPVEDDDGNKSTVRFSRKTKEQYVATEVDGKATGWTSKFV
DGKWVTESKKKAKPKAKPKAKAKAKS

Sequences:
NA

Specific function: NA

COG id: COG0550

COG function: function code L; Topoisomerase IA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA