Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

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Identifier: 170725718

GI number:

Start: 1707307

End: 1710429

Strand: Direct

Name: Not Available

Synonym: Swoo_1357

Alternate gene names: NA

Gene position: NA

Preceding gene: 170725717

Following gene: 170725719

Centisome position: NA

GC content: NA

Gene sequence:

>3123_bases
ATGATTAGTGACTTTTTTATTAATAGGCCTAAATTTGCCTTTGTGATCTCAACGGTGCTGACGATTGTCGGCCTTATCTC
TATTCCTATCTTGTCGGTGGCGGAGTTTCCAGAGATCGCACCGCCGCAGATTAATGTCTCTACTAGCTACTCTGGTGCTA
GTGCCAACATAGTGAAAGACACCATAGCTCAGCCAATAGAGGCTGAGGTGAATGGTGTCGAAGGCATGCTCTACATGCAG
TCAAAGAGTGCCAATGATGGCAGCTACTCTTTGAGTGTGACCTTTGAGGTGGGTACTGATCCTGATATGGCTCAGGTAAA
AGTACAAAACCGAGTTCAGCAGGCGATGCCAAGGCTGCCTGAAGAGGTTAAACGTCAAGGGGTTAACGTAGAGAAACAGA
GCGCGAATATCTTGATGGTGGTGAACTTGGTTTCGCCAAAGGAGACCTTCGATTCTCTGTTTATTACCAACTATGCGGGC
TTAAATGTCACCGATGCGTTAGCACGTCAAAATGGTGTGTCGAAAGTGCAGGTGATTGGTGCTCTCGACTATGCGATTCG
GATCTGGCTAGACCCGAATAAGATGGCAAGTCTTGGGGTGACGGCCAAAGATGTGATTGGCGCTCTGCAAGAGCAGAACA
TTCAGGTTGCCGCTGGACGTATCGGTGCTGCACCTGTGGATCCTGATCAGCAGTTTCAATACACGCTTCAGACAAAAGGT
CGCTTGAAAGATCCTAAAGAGTTCAGAAATGTGATGATCCGCGCTAACAATGATGGCTCTAAGGTGATTGTTGGAGATGT
TGCGCGTGTAGAGCTGGGCTCACAAACGTATGATGCTCAGGGTAAGCTAAATAATAAGCCGTCGGCGATTATCGCTATTT
ATCAATCTCCAGATGCCAATGCATTGGATGTGGGTAAAGCGGTTAAAGCTGAGATGGCGAAACTGTCTGAGCGTTTTCCG
AATGATCTCGACTATGAGGTGCTATATGACACCACAGAGTTTGTTGAAACTTCGATTAATGAAGTGGTGCAAACTCTATT
TATCTCGATAGCACTCGTGGTCTTTGTAGTGTTTATCTTCCTGCAGGATGTCCGCTCTACTTTGATCCCTGCGATTGCCA
TTCCTGTCTCCCTAATTGGTACGTTTGCCTTCCTATTGGCTTTTGGAATGAGCATCAACACGGTCTCGCTATTTGCGTTG
ATATTGGCTATCGGTATTGTGGTCGATGATGCGATTGTGGTGGTGGAGAACGTAACACGCCTAATGCAAGATGAGGGCTT
GTCACCAAAAGAAGCGACCTCTAAAGCGATGAAAGAGGTGACAGGTCCCGTTATTGCGACCACTTTAGTGTTACTGGCGG
TGTTTGCTCCTACAGCGGTTATGCCAGGAATAACAGGTCAGATGTATGCACAGTTCTCCGTGACTATCTGTATCTCTGTA
CTAATCTCGTCTATTAACGCATTGACATTGAGCCCAGCGCTTTGTGCGTCACTACTGCGACCACCTAAGCAACATACTAA
AGGCTTCCACGCCACGTTTAACAAGTACTTTGAACGTGTGACTGGTAAGTATATGGGATTGGTTTCATCACTCACCCGTA
AGCTCTCTTTGGTTTTAGTCGTGTATGCTTGTTTGATTGCGGTGACTGGAGGAGTGGCGAAGATATTACCATCAGGGTTT
GTGCCAATGGAGGATAAAAAAGCCTTTATGGTGGATATCCAACTACCTGATGGCGCTTCATTGAACCGAACCGAAGAGGT
GATGAAAGAGCTGGTGGAGCTGACGTTAGCAGAGCCAGGTGTTGAGAATGTGATCCATGCAAGTGGCTTTAGTATTTTGA
CTGGCTCAGTTGCTTCAAATGGTGGTTTGATGATCGTTTCCCTTTCTACTTGGGATGAGCGTGATACTCCAGATATGGTG
GAGTCAGCCATTGTTGCTAAGCTGCAGGCGAAATACGCGGCTAACCCATCAGTGAAGGCGATGGCATTCTCGCTACCACC
GATCCCTGGAGTGGGAAGCGTAGGTGGTTTTGAGTTTGTACTACAAGACACTCAAGGGCGAACACCACAAGAGCTGGCAT
CTGTAATGCGCGCCTTGATAATGAAGGCAAATAGTCAACCTGAAATCGCCATGGCCTTCAGTAATTTCCGCGCCGATGTG
CCACAGATGTATGTGGATGTTGACAGGGATAAGGCTAAGGCGCTTGGTATATCGCTCAATGAGATTTTCACAACCATGCA
GACCATGTTGGGCTCTATGTATGTGAATGACTTTAACCGTTTCGGTAAAGTGTTTAGGGTGATTTTACAGGCAGAAGGAG
AGTTTCGTAACTCAGATCAAGATATCTCGCGCTTTTATGTTCGCTCTAATACAGGGGAGATGGTGCCTCTGAGCACCTTA
GTTAAAGTCACGCCTATCCTAGGGCCGGATGTGATGAACTCCTATAATATGTTCAACTCCACAACGATTAACGGTTTCCC
TGCACCAGGATTCAGTTCAGGTGATGCCATCACTGCGATGGAGAGGGCTGCGAATGAGACGCTGCCAACAGGGTATACGT
TTGAGTGGACGGGACAAACCTATCAGGAGATCAAAGCGGGTAACTTAGCACCCTTGATCTTTGGCTTAGCACTTCTATTC
ACCTACCTGTTTTTGGTGGCGCAATATGAGAGCTGGACAATTCCATTTGCGGTTATTCTGGCGGTGCCCATAGCGGTACT
TGGCGCCTTCTTGAATATCTTGCTGGTGGGCTCAGATCTGAACCTTTATGCCCAGATTGGCTTAGTGTTGCTGATAGGAC
TTGCCTGTAAGAACGCTATCTTGATTGTGGAGTTTGCTAAGCAATTAAGAGAGGAGGGTAAGAGTATCCTCGATGCGGGT
GAAACGGCGGCAAGACTACGTTTCCGGGCGGTATTGATGACAGCATTCTCCTTCCTACTTGGGGTGTTGCCTTTGGTTAT
TGCCACAGGTGCGGGCGCGGGAAGCCGTCGTGCACTGGGTTATTCCGTGTTTGGCGGTATGTTGGCTGCAACCATAGTAG
GTACGCTACTAGTGCCTGTATTCTACGTGATGATGCAGACAATGAGAGAGAAGTTTAAAGGTAAAGCAAAAGCTGCTGAG
TAG

Upstream 100 bases:

>100_bases
GACAGGGGATTGTCATGATTAGTGATTTTTTTATTAGCTTGGACCTAAATTTGCTTGGGTCTGAGTTTAAGGTTGAATTT
AATGGTGACAGGGGATCGTC

Downstream 100 bases:

>100_bases
TTAGCTTTAGCAGCTGTTTTACTTACACGTAAAGGCTCATCAGATGATGAGCCTTTCTTTATTGGTATTAGTGTTTACAA
ATTCTAAATTCATGATATTA

Product: hydrophobe/amphiphile efflux-1 (HAE1) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1040_residues
MISDFFINRPKFAFVISTVLTIVGLISIPILSVAEFPEIAPPQINVSTSYSGASANIVKDTIAQPIEAEVNGVEGMLYMQ
SKSANDGSYSLSVTFEVGTDPDMAQVKVQNRVQQAMPRLPEEVKRQGVNVEKQSANILMVVNLVSPKETFDSLFITNYAG
LNVTDALARQNGVSKVQVIGALDYAIRIWLDPNKMASLGVTAKDVIGALQEQNIQVAAGRIGAAPVDPDQQFQYTLQTKG
RLKDPKEFRNVMIRANNDGSKVIVGDVARVELGSQTYDAQGKLNNKPSAIIAIYQSPDANALDVGKAVKAEMAKLSERFP
NDLDYEVLYDTTEFVETSINEVVQTLFISIALVVFVVFIFLQDVRSTLIPAIAIPVSLIGTFAFLLAFGMSINTVSLFAL
ILAIGIVVDDAIVVVENVTRLMQDEGLSPKEATSKAMKEVTGPVIATTLVLLAVFAPTAVMPGITGQMYAQFSVTICISV
LISSINALTLSPALCASLLRPPKQHTKGFHATFNKYFERVTGKYMGLVSSLTRKLSLVLVVYACLIAVTGGVAKILPSGF
VPMEDKKAFMVDIQLPDGASLNRTEEVMKELVELTLAEPGVENVIHASGFSILTGSVASNGGLMIVSLSTWDERDTPDMV
ESAIVAKLQAKYAANPSVKAMAFSLPPIPGVGSVGGFEFVLQDTQGRTPQELASVMRALIMKANSQPEIAMAFSNFRADV
PQMYVDVDRDKAKALGISLNEIFTTMQTMLGSMYVNDFNRFGKVFRVILQAEGEFRNSDQDISRFYVRSNTGEMVPLSTL
VKVTPILGPDVMNSYNMFNSTTINGFPAPGFSSGDAITAMERAANETLPTGYTFEWTGQTYQEIKAGNLAPLIFGLALLF
TYLFLVAQYESWTIPFAVILAVPIAVLGAFLNILLVGSDLNLYAQIGLVLLIGLACKNAILIVEFAKQLREEGKSILDAG
ETAARLRFRAVLMTAFSFLLGVLPLVIATGAGAGSRRALGYSVFGGMLAATIVGTLLVPVFYVMMQTMREKFKGKAKAAE

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA