| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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Identifier: 170725299
GI number:
Start: 1241094
End: 1245374
Strand: Reverse
Name: Not Available
Synonym: Swoo_0937
Alternate gene names: NA
Gene position: NA
Preceding gene: 170725300
Following gene: 170725295
Centisome position: NA
GC content: NA
Gene sequence:
>4281_bases ATGAAAGAACTTACAATAGATGGTAAGTGTCTATCGGCTAATCCAGAAACAACTCTGTTCCACATCGCAAAAGAAGCCGG GATCACTATCCCAAACCTCTGTCAGCAGCATAATGGCCTAAACTTTCCCAATAACGAGAAGAGCCACTGCAATCTGTGTC AGGTGGAAGTGCAAACCTTCGATAACCAGAACCAAGCGAATACAGTCACAGTCAAAGCCTGTGATACTCAGTTAGTATCC CTCTATTCAAATAACACCCAGAAAATTGAAGTTATCACTCAATCAACTCGACTTAGTTTACTCAGACAAGCTGCGCTAAA TGAGATCCTTAAAGATCATTTCGCCGACTGTCAGGCTCCCTGCCAGCAAGCCTGCCCAGCAGGTGTCGATGTGCAATCTT ACCTCTTTCATATCGCACAAGGAGAGCACACTGAAGCGGTAAAAGTGATAAAGCAAACCCTGCCACTTCCCCTCTCAATA GGACGAGTTTGCCCCGCTTTTTGTGAAACAGAGTGTCGTCGTGGCTTAATCGATGAACCCGTTGCCATTAGGCAACTAAA ACGCCATGCAGCCGATCTCGATATTCAGGACGAATTCAGCTACATGCCAGAGAAGTTACCTGCAACAGGTAAAAAGGTCG CAATAATTGGCAGCGGACCTGCAGGGATAACCACAGGTTACTATCTCTCAAACTCAGGCCATGATGTCACTATCTTTGAG GCGATGCCAAAAGCTGGCGGTTGGCTTCGTTATGGTATTCCTGAATATCGACTTCCTAAGGCGATCCTCGACAAAGAGAT TGAACAACTGTGTCAAAATGGCTTGAAGATCCTGACCAATACTAAACTTGGTGAACAGATACATCTTAACCAGCTAGTCG AAGACTTCGATGCGGTTTGTCTGGCAATAGGCGCTCAAAAAGCCGTGGCAATGGATTATCCAGGCAGCGATCTGGCAGGC TGCTATTTAGGCGTTGACTACCTAAAAGATCACTGCACAGATAAACATCTCATCACAGGTAAAAAAGTGATGGTAATTGG AGGGGGAAATACCGCTATCGATTGTGCTCGCACTGCTAAACGTGAAGGTGCAGAAGTCACACTGGTCTACCGCCGTACAC GGGATGAGATGCCAGCAGAGCTGTATGAGATAGAGGAAGCTGAACATGAAGGGATTAAGTTTCACTACTTAACTAACCCA ATTGAGAACCACAGTGACTCTCAAGGGCGTGTTATGAGTGTCACCCTTGAAAAGATGAGATTAGGCGAGCCAGATCCCTC AGGGCGAAGAGCTCCCATCCCTACAGGTGAAACTTTCACTCAAGCATTTGATACCGTGATCCCAGCGGTCTCTCAGACAC CAGATATGGCATTTCTATCGGATCCACAAAGTCAGCTCACTACAGGAAAGCTCGCTCTCACTCGCTGGAACACCTTCCAA GGTTGTGAGCAGACCATGTCTGCAGGCCTATCAACCAAGATAGATAAACTCTTTGTACTTGGTGACTCGAGAACGGGTCC TGCTACTGCTGTTGCAGCCGTTGCCGATGGAAGAAAAGCCGCACAAGCGATCGAAAAACTGCTCACCTCAGGCTTAAGCT GCGAACTGGTGCAGCATGAATTTAACTCTACTAAATCAATAAAAACCGCAAATCTTAATGGGGATATTTACCCTAATGCA CCTAAACAGCTGAAGGCAAAAATGCCTGAGCTTAGCATTAAAGAGAGAGCTCTCAATTTCAATGAGATTGAGTTAGGCTT TGAGCCCAGCGAGGCGATGAAAGAGGCTGCAAGATGCCTTGAGTGTGCCTGCCAGGCAAATACAGACTGTAAACTTCGAG ATTATGCCACCGAATACAAGGTTGATAACTGTACTCAAGATGCCACCCTCTCTCCCAGACAGTTCAGTGTCGATAACTCA AGTCCTTTTATCACCTTCGACGCAAACCGCTGTATAAGCTGCGGTGCATGTGTCGATATCTGTCAGCAACAAAGTGGCCA TAAAGCAATCAGCTTCACAGAGGAGCATTACCAAGCACTCCCGACCCAAGAGAAAAACTCAGTACGAAGAGCGCCGCGAG TGGGGTTTGCAGCCACCATGTTAGACAGTAACTGTGTGCAATGTGGTAACTGTATTCAAGTCTGCCCAACTGGCGCCCTT GTCGATGCAAGAGACAAGACTCAAGGCCGCACAAAGCCTAGTGAACAAGCCAGTACCATATGTACATACTGCGGTATCGG TTGCCGCCTCAATGTGCACGTAGACAGAGAGAATAACAAGATAACCCGAGTCAGTGGCGATCCAGACTCAGTGGTCAATC AAGGCATGCTATGTGTTAAAGGCCGCTTTGGTTTCGATTTTATCACTAGCAAGCAGAGACTCACCCAGCCACTACTGCGC AAAGATAAACAACTTGTGCCAGTATCTTGGAGTGAAGCATTAGACTTTATCGGCACTAAACTTAGGCATATTATCAGCTC CCATGGCGGTAATGCCGTTGCTGGGCTCGCCTCAGCCAAAGCTACCAATGAAGATAACTATCTGTTTCAGAAGTTATTCA GGGCAGTTATTGGCACAAATAACATCGATCATTGTGCACGCCTTTGCCACGCCTCAACAGTCACAGCGCTACAAGAGAGC CTTGGAAGCGGTGCCATGACCAATGATATTCCAGGCATTGTAGATTCTGATCTTATCTTTATCATAGGATCTGATACCAG TAACGCGCATCCCATTATCGCATCCCATATAAAATCAGCCATTCGCCAGCATGGCGCAACCTTACTTGTAGCCGATCCCA AAAAAGTCGATATTGCCGATCATGCCAAGCTCTATGTCAGCCATAAGCCTGGCACAGATGTGATGCTACTTAACGCCATC ATGCAAGTTATCATCAAAAATGATTGGCACGATCTCGATTATATTCAAGCTAGGGTCGATGACTACAGTTCACTCTATGA TGAGGTGATGAAAAGCGACTACCGCCTTGAAAATGCAGCTCTAATAACTGGCGTTCCTGCCAAACAGATAACTGAAATGG CAAACATGATCGGTACAGCAACTAAAACTGCCGTCTACTATGCCATGGGCGTGACCCAACATACCTCAGGTCATAACAAT GTTACAGCCATCGCCAATCTGCAGCTACTTTGCGGCAATATCGGCATCAAAGGGGGCGGTATTAACCCTCTTCGGGGACA GAGCAATGTCCAAGGAGCTTGCGACATGGGCGCCCTACCAAACTACTTCAGCGGCTATCAAAAAGTTGACGATCCCTTGG TTCAAGTTCGTTTTCGAGAAGCTTGGGGAATAGAAGATCTGCCCCATCAAATCGGCTTAGCCGCAACCGAAATGATGCAA GCCTTATCCCATGGGGAATTAAAGGCGCTCTATGTAATGGGAGAAAACCCAGTATTGAGCGATCCCGATCAAGCCCATGT TCTGCTGGCGCTCAAAAAAGCAGAGCTGTTAATTGTACAAGATATATTCCTTACAGAGACCGCAGCACTGGCAGATGTCG TGCTTCCCGCAAATGCTTTCGCAGAAAAAAGCGGTCACTTTACCAATACCGAGCGGCGAATTCAGCAGCTACAAACTGTG GTCAAAGCTCCGGGCAGTGCAAGACTCGACTGGCAGATAATTCAAGATATCGCCAATCGACTCGGCGCAGATTGGCACTA TAGAGATGAAAAACAGATCTGGCACGAGATCACCTGTGTGACTCCGCAATACAGAGGGGCTAGCTGGCAAGCGATAGATA GCCGTACTCGAAATGGAAAACTGGGGCTCCAATGGCCTTGCCCAGCAGAAAACCACCCAGGGACTCCAATTTTACATACG ACTAAGTTTACCCGAGGTCGGGCAAAGATGACGCCGGTAAGTTACAGCTTACCTGCCGAACCCACTTGTAGTGAATACCC ACTTACCCTATCGACGGGACGACTGCTGGAGCAGTTCCACACAGGCACATTGACTCGTAAAACACCGGGGTTAGATGAAC TTGGTAAACCAAAAGTCATGATATCCGTCTTCGATGCCGACAAACTGGGTATAAACAATGGCGATATGCTGAAGATATCC AGTCGCCGAGGTGAGATAGAGATCTGCGCTTTTGTCACTCGTCGTGCTCAAGTAGGCGTCTTGTTTCTCCCCTTCCACTT CGTTGAAGCGGCCGCCAATAAACTCACCATTAACGCAATCGATCCTATCGCCAAAATTCCTGAATTTAAGATCTGTGCAG TTAAGGTTGAAAAAGTGTCTGTAACAGCAGAGCTGAGTTAA
Upstream 100 bases:
>100_bases AAGAAATCGACTAACCCTAAGTCATATTCAGCAAGTCGAGCCTGTCGCTAAAAACACGCTATAAAAACTCGAATAGAAGC CAATGAATAAAGGTAACCCC
Downstream 100 bases:
>100_bases TCCTATCAACAGGAGTAAGCAGGAAAAGGTATTTCCAGCTTACTCCGAACCAGCTTAACTAATTACAGCTCCTAAAATGG CAAAGCTAAGCACCAGATAG
Product: formate dehydrogenase subunit alpha
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1426_residues MKELTIDGKCLSANPETTLFHIAKEAGITIPNLCQQHNGLNFPNNEKSHCNLCQVEVQTFDNQNQANTVTVKACDTQLVS LYSNNTQKIEVITQSTRLSLLRQAALNEILKDHFADCQAPCQQACPAGVDVQSYLFHIAQGEHTEAVKVIKQTLPLPLSI GRVCPAFCETECRRGLIDEPVAIRQLKRHAADLDIQDEFSYMPEKLPATGKKVAIIGSGPAGITTGYYLSNSGHDVTIFE AMPKAGGWLRYGIPEYRLPKAILDKEIEQLCQNGLKILTNTKLGEQIHLNQLVEDFDAVCLAIGAQKAVAMDYPGSDLAG CYLGVDYLKDHCTDKHLITGKKVMVIGGGNTAIDCARTAKREGAEVTLVYRRTRDEMPAELYEIEEAEHEGIKFHYLTNP IENHSDSQGRVMSVTLEKMRLGEPDPSGRRAPIPTGETFTQAFDTVIPAVSQTPDMAFLSDPQSQLTTGKLALTRWNTFQ GCEQTMSAGLSTKIDKLFVLGDSRTGPATAVAAVADGRKAAQAIEKLLTSGLSCELVQHEFNSTKSIKTANLNGDIYPNA PKQLKAKMPELSIKERALNFNEIELGFEPSEAMKEAARCLECACQANTDCKLRDYATEYKVDNCTQDATLSPRQFSVDNS SPFITFDANRCISCGACVDICQQQSGHKAISFTEEHYQALPTQEKNSVRRAPRVGFAATMLDSNCVQCGNCIQVCPTGAL VDARDKTQGRTKPSEQASTICTYCGIGCRLNVHVDRENNKITRVSGDPDSVVNQGMLCVKGRFGFDFITSKQRLTQPLLR KDKQLVPVSWSEALDFIGTKLRHIISSHGGNAVAGLASAKATNEDNYLFQKLFRAVIGTNNIDHCARLCHASTVTALQES LGSGAMTNDIPGIVDSDLIFIIGSDTSNAHPIIASHIKSAIRQHGATLLVADPKKVDIADHAKLYVSHKPGTDVMLLNAI MQVIIKNDWHDLDYIQARVDDYSSLYDEVMKSDYRLENAALITGVPAKQITEMANMIGTATKTAVYYAMGVTQHTSGHNN VTAIANLQLLCGNIGIKGGGINPLRGQSNVQGACDMGALPNYFSGYQKVDDPLVQVRFREAWGIEDLPHQIGLAATEMMQ ALSHGELKALYVMGENPVLSDPDQAHVLLALKKAELLIVQDIFLTETAALADVVLPANAFAEKSGHFTNTERRIQQLQTV VKAPGSARLDWQIIQDIANRLGADWHYRDEKQIWHEITCVTPQYRGASWQAIDSRTRNGKLGLQWPCPAENHPGTPILHT TKFTRGRAKMTPVSYSLPAEPTCSEYPLTLSTGRLLEQFHTGTLTRKTPGLDELGKPKVMISVFDADKLGINNGDMLKIS SRRGEIEICAFVTRRAQVGVLFLPFHFVEAAANKLTINAIDPIAKIPEFKICAVKVEKVSVTAELS
Sequences:
NA
Specific function: NA
COG id: COG3383
COG function: function code R; Uncharacterized anaerobic dehydrogenase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA