| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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Identifier: 170724869
GI number:
Start: 714927
End: 717401
Strand: Reverse
Name: Not Available
Synonym: Swoo_0503
Alternate gene names: NA
Gene position: NA
Preceding gene: 170724870
Following gene: 170724868
Centisome position: NA
GC content: NA
Gene sequence:
>2475_bases ATGAGCATCAATAAAGCAAAACTGACTGAAACCGATATCATCACCAAATTCATCATGCCAGCGATTAAAGATGCGGGCTG GAATGATATGACGCAAATTCGCCAAGAGGTGAAACTGCGCGACGGTAAGGTCATTGTGCGTGGCCAACTCGGTGTGCGCA AAACCGTAAAGTCTGCTGATATTGTGCTTTATCACAAACCAAGCATGCCACTTGCTGTGATTGAGGCTAAAGCTAACAAA CATGAAGTAGGCAAAGGCATGCAGCAAGGGCTCGATTATGCACGCTTGCTTGAGGTACCTTTCATCTTTGCCTCTAACGG TGATGGCTTTATCTTTCACGACAAAACCCATGCCGTCACAAACAGTCAAGGCACATCAGAAGCTCACTACCTAGAATCCG AAATCCGCCTTGAGGACTTCCCATCACCACAAGAGCTCTGGGCCAAGTATTGCGCTTGGAAAGGCTACACCGAAAAGCAG CTACCCATTATCAATCAAGAATACTATGACGATGGTAGCGGTAAGCATCCTCGTTATTATCAACTGCAAGCCATCAACAA GACCGTAGAAGCAATATCATCAGGTAAAGACCGTGTATTGCTGGTCATGGCAACAGGCACAGGTAAAACTTACACGGCGT TTCAAATCATCTGGCGCTTATGGAAGTCTCGCGCTAAAAAACGCATTCTATTCCTAGCCGACCGTAATATCTTAGTCGAC CAAACTCGCATAAATGACTTTCAACCGTTCGGTCAATCCATGACTAAGATAACCGGCAGAACCGTTGACCCTTCATACGA GATACACCTCGCACTCTATCAAGCCTTAACTGGCCCAGAAGAGAGCCAGAAAGCCTTTAAGCAAGTAGACCCAGACTTCT TTGACTTAATCATTATCGACGAGTGCCATCGCGGTAGTGCCTCTGAAGACAGCGCATGGCGTGAGATTCTAGAGTATTTC AAAAGTGCAGCTCAAGTAGGTTTAACGGCGACCCCTAAAGAAACGACTGAAGTATCAAACTCAGACTACTTTGGTGATCC GGCTTATACCTATTCCCTTAAAGAAGGTATTGAAGACGGCTTCTTAGCACCCTATAAAGTGGTGCGCGTAGATATTGATG TTGATCTACAAGGCTGGCGACCAACAAAAGGCCAAATAGATAATCAAGGTGAGGTAATAGAAGACCGTATCTATAACCAA AAAGACTTTGACCGCACCATGGTGATTGATGAGCGGACTCAGCTGGTGGCTGAGACGATAACCAACTACCTAAAGCGTAC AGACCCAATGGCAAAGACCATTGTATTTTGTAACGACATCGACCACGCCGAACGCATGCGCCGTGCTATCGCCAACCTCA ATCCAGAGCAAATGGCGAAGAACGATAAGTACGTGATGAAAATCACTGGTGATGATGAGCTAGGTAAAGCACAGCTTGAT AACTTCATCAACCCTAAAAAACCTTACCCTGTCATTGCCACTACTTCAGAGCTGATGACCACAGGTGTCGATGCTAAAAC CTGTAAGCTGGTGGTACTGGATCAAAACATTCAGTCAATGACTAAGTTTAAACAGATCATTGGTCGCGGCACCCGTATCG ATGACAGATACGGCAAGTTGTGGTTCACCATCTTAGACTTCAAAAAGGCTACCGAACTGTTTGCCGATGAGCGCTTTGAT GGTACGCCAGAGAAGGTCTTAGTCGTTACCCCTACAGATATAGAAGATGACGATACTGACATTGATGGCACAGATTCGAT TGATGACCCAAGTGATGAAGATAATCCATTCGATGATGGTGAGCTTGGTGGCGATAGCAGTAATAATCAACCCGATGGTA ATGGCGATGGTGCTCAAACAGGTGAAGGTGAATGGACAGACGATGAAACTCGTAAAGTAGCCAAATACCGAGTCTCGGGT GTAAGCGTTAGTAAAGTTGCAGAGCGTGTGCAGTACTACGATAGCGACGGCAAGTTAGTTACCGAGTCTTTCAAAGACTA CACTCGCAAAACCATGGCTAAGCAGTTCAGCTCTCTCGATGAATTCGTAAAGCGCTGGAATGATTCTGACCGTAAACAAG CCATCATCGATGAGCTCGCACAAGAAGGCATTATCTGGGCCGCACTTGAAGAAGAGGTTGGCAAAGATATGGATCCATTC GACATGATCTGTCATGCGGTATACGACCAACCACCACTAACGCGTAAAGAACGTGCAAATAACGTTAAAAAGCGTAATTA CTTCACCAAATACTCTGACACAGCCCAAGCAGTATTACAGAATTTACTGTTAAAATACGCCGATGTTGGGGTGCAAGAAA TTGAATCAATGCAGGTGCTCAAAGTACAACCCTTTAACGAGATTGGCAGCCTCAGTGAAATCGTTAAAAAAGGCTTTGGT GGTAAAAAAGAGTACGAGCAAGCGATTAGCGAATTGGAAGCTGAGATTTATCAGCTCCACCAGCAATCAGCTTAA
Upstream 100 bases:
>100_bases AGCTAAATCCTGTGCTTCCTTAGGGCTTTATGACACAATCCGAATGGGCAAAGCTGTCCGCAACGGTTTGTTATCTTTCC TAGAAGGACCTTGTTAGGTT
Downstream 100 bases:
>100_bases CAATCGCGCCGCGTAAAGCATGCAATAAAACCGTTATTTCACAGGCTTGATTAATCATTTAATCGAGCCTGTTTTCAAAT TAAAGAGAATACTATGTCTA
Product: EcoEI R domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>824_residues MSINKAKLTETDIITKFIMPAIKDAGWNDMTQIRQEVKLRDGKVIVRGQLGVRKTVKSADIVLYHKPSMPLAVIEAKANK HEVGKGMQQGLDYARLLEVPFIFASNGDGFIFHDKTHAVTNSQGTSEAHYLESEIRLEDFPSPQELWAKYCAWKGYTEKQ LPIINQEYYDDGSGKHPRYYQLQAINKTVEAISSGKDRVLLVMATGTGKTYTAFQIIWRLWKSRAKKRILFLADRNILVD QTRINDFQPFGQSMTKITGRTVDPSYEIHLALYQALTGPEESQKAFKQVDPDFFDLIIIDECHRGSASEDSAWREILEYF KSAAQVGLTATPKETTEVSNSDYFGDPAYTYSLKEGIEDGFLAPYKVVRVDIDVDLQGWRPTKGQIDNQGEVIEDRIYNQ KDFDRTMVIDERTQLVAETITNYLKRTDPMAKTIVFCNDIDHAERMRRAIANLNPEQMAKNDKYVMKITGDDELGKAQLD NFINPKKPYPVIATTSELMTTGVDAKTCKLVVLDQNIQSMTKFKQIIGRGTRIDDRYGKLWFTILDFKKATELFADERFD GTPEKVLVVTPTDIEDDDTDIDGTDSIDDPSDEDNPFDDGELGGDSSNNQPDGNGDGAQTGEGEWTDDETRKVAKYRVSG VSVSKVAERVQYYDSDGKLVTESFKDYTRKTMAKQFSSLDEFVKRWNDSDRKQAIIDELAQEGIIWAALEEEVGKDMDPF DMICHAVYDQPPLTRKERANNVKKRNYFTKYSDTAQAVLQNLLLKYADVGVQEIESMQVLKVQPFNEIGSLSEIVKKGFG GKKEYEQAISELEAEIYQLHQQSA
Sequences:
NA
Specific function: NA
COG id: COG4096
COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA