| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 170724843
GI number:
Start: 595085
End: 597265
Strand: Reverse
Name: Not Available
Synonym: Swoo_0476
Alternate gene names: NA
Gene position: NA
Preceding gene: 170724844
Following gene: 170724842
Centisome position: NA
GC content: NA
Gene sequence:
>2181_bases GTGTCGACATCAGTTCCTAAAAAAACTGAGCAATGGACAGTGTCAGCCTCACAGCGAGTGACAGTCGATCCATTGCTAGA CAGTTTAGTATTATTGACCGAATACTTCGGTAGTCCCTGCTCCAGCGAATCGATGGCGGCAGGTCTACCTTTGTCCGGTA GTGTACTTACTCCAGATCTGGTTCCCCAAGCTGCAGGGAGGGCAGGCTTAGCAGCCAAGCTCACTCAAAAAGGCTTGAAT CAGATCTCGCCTATATTTTTACCTTGTATCTTGCTACTTAAAGATAAAAAGGCATGCTTACTCCGTGAGTTAGATGTAGA GAAAGACAAAGCTGTTATTCAACTACCAGAAACTGGTGGTGAACAGGTACTGACACTTGAAGATTTAGAGGCGATCTATG TTGGCTATCTTTTTCTTGTAAAGCAGCAGTACCGTGGTGACATGGGCTTTGATGTTCATCAACATGACAGCACAACACAT TGGTTAGTGCAGACCCTTAGGGACTCTGCACCTATCTATCGAGATGCGCTACTGGCATCGGTTTTAGTTAACCTATTTGC GTTAGTGTCCCCACTCTTTATCATGAATGTGTATGACAAAGTTGTGCCAAACTTAGCTTTCTCATCACTTTGGGTACTCG CCATAGGCGCGAGTGTCGCTTACATATTTGATCTAATACTAAGACAGCTTCGATCCTACCTTATTGATGTGGCTGGGAAA AAAGTTGATATCATTGTTTCATCCAGGCTATTTGCTAAAGCGATAGGTATACCGCTAGAGAAGCGCTCCCCTAGCGTCGG TGGAATGGCACGGCAACTGGGCGAATTTGACAGCATTAGAGAGATATTAACCTCGGCAACCATCACTACTTTAGTCGATC TCCCTTTTGCCATATTTTTCATGATCATCATTTACGTTGTAGCCGGTGATCTGGCCGTAATACCTCTGATAGGCAGTATG ATCATTATTGGTTATACACTAGTCATGCAACCTAAGTTAAAAGCGGCTATTGAAGAGAGTAATAAGTTTTCTAGCTTAAA ACACGGACACCTTATTGAGTCTTTAGCGTCTCTAGAATCAATTAAATCTAGTGGTGCAGAGGGTTTAGTGCAAAAAAGTT GGCAGCAGATGATTGGTCATACAGCCAATTGGCAGCTTAAATCTAAAAAGATCTCGACAGCAGTCACTAACTTAGCCAAT TTTGTCGTGCAACTTTCTGTTGTTTGTGTCGTGATTTTAGGGGTTTACCGAGTTGCCGATAACGAAATATCTATGGGTGG GATTATTGCGGCGGTGATCCTGTCCAGCAGAGCTATCTCCCCTATGGCGCAGCTAGCAGGCCTTATGACTCGTGGTAACC ACACAGCAAGTGCACTACGCCAACTTAACGAGATCATGACTCAAGAAGATGAGTTTGAAAATAAAGGTCATCTTGTAAGC CGTCAACGCTTGCAGGGTAAAATCAGTGCAGACCATATTAGCTTCGCGTATCCTGGCTCTGAAAAGCCAGTACTGCACCC AATGTCTATCAATATTGAGCCCGGAGAGCGTATTGCCATTATTGGCCGCAATGGTTCAGGAAAGAGCACATTGGCTAAAA TGCTTGTGGGCCTCTACCAACCAACAAAAGGCAGTCTGCGTTATGACGGTCTTGACTCAGCCCAGATCCACCCTACAGAT TTAAGACGTAATTTTGGTTACTTGCCTCAAGATATCACTCTCTTTCACGGCACTATCAGGGACAATATCCTCTTCGGCAC TCGTCAAGTCACAGAACATCAATTGATCAGAGCCGTTCAACTCTCTGGGATCAGTCAGTTTACCGATTTAGACAGCGAAG GTTTAGATCAGCAAGTAGGTGAAGGCGGCCAGTCACTCTCACGTGGGCAGAGACAGACCGTAGCCCTCGCTAGAGCAACC CTAAACGATCCTCCAGTGCTCTTAATGGATGAACCTAGTGCGAGCTTAGATGCTAGAGCAGAGAAGCAGTTTATTCATGC AATGCAAAATGTAACCAGAGACAGAACCTTGCTGCTTATTACCCATAAGATGCACCTGTTAAAACTGGTTGACCGAATAG TCGTGTTAGACAGAGGACATGTGGTCATCGATGGACCCAAAGCGGAAGTGCTAGACAAGCTAAGTAAAGGTTTGCTTGCC GGAGGGCAAACCAATGAGTAA
Upstream 100 bases:
>100_bases AGCAAAATGATGATTTAAATCAAATTAGAGAATTTTTATCAAGATTTATGTAATATAATGAAATCAAATTGATAATAAAA TCTTAAGGATATGCGTTTAG
Downstream 100 bases:
>100_bases AAAACTAACCACTCATGATCTTGAGATGATCGATGATGTTTATGGTGCCATGATGACAGATGCACCAAGCAGTCATAGGT TAATCATCTGGACACTAGTG
Product: type I secretion system ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>726_residues MSTSVPKKTEQWTVSASQRVTVDPLLDSLVLLTEYFGSPCSSESMAAGLPLSGSVLTPDLVPQAAGRAGLAAKLTQKGLN QISPIFLPCILLLKDKKACLLRELDVEKDKAVIQLPETGGEQVLTLEDLEAIYVGYLFLVKQQYRGDMGFDVHQHDSTTH WLVQTLRDSAPIYRDALLASVLVNLFALVSPLFIMNVYDKVVPNLAFSSLWVLAIGASVAYIFDLILRQLRSYLIDVAGK KVDIIVSSRLFAKAIGIPLEKRSPSVGGMARQLGEFDSIREILTSATITTLVDLPFAIFFMIIIYVVAGDLAVIPLIGSM IIIGYTLVMQPKLKAAIEESNKFSSLKHGHLIESLASLESIKSSGAEGLVQKSWQQMIGHTANWQLKSKKISTAVTNLAN FVVQLSVVCVVILGVYRVADNEISMGGIIAAVILSSRAISPMAQLAGLMTRGNHTASALRQLNEIMTQEDEFENKGHLVS RQRLQGKISADHISFAYPGSEKPVLHPMSINIEPGERIAIIGRNGSGKSTLAKMLVGLYQPTKGSLRYDGLDSAQIHPTD LRRNFGYLPQDITLFHGTIRDNILFGTRQVTEHQLIRAVQLSGISQFTDLDSEGLDQQVGEGGQSLSRGQRQTVALARAT LNDPPVLLMDEPSASLDARAEKQFIHAMQNVTRDRTLLLITHKMHLLKLVDRIVVLDRGHVVIDGPKAEVLDKLSKGLLA GGQTNE
Sequences:
NA
Specific function: NA
COG id: COG2274
COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA