Definition Shewanella woodyi ATCC 51908 chromosome, complete genome.
Accession NC_010506
Length 5,935,403

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 170724683

GI number:

Start: 387315

End: 389024

Strand: Reverse

Name: Not Available

Synonym: Swoo_0313

Alternate gene names: NA

Gene position: NA

Preceding gene: 170724684

Following gene: 170724682

Centisome position: NA

GC content: NA

Gene sequence:

>1710_bases
ATGCCAACAACAGGCCTGCACTTAGGTCTCTCCACTCTTTTCATCCGTAAAAATTTGCTCACAGAGGAGCAGATCGCTTC
CTCTATCGCCAAATCTAGACAAAGCAAACAATCTCTTGTCTCAACCGTTATCTCTGAAAAGTTAATTTCGGCTCGTGAAA
TTGCAGAACTCTGTTATGAAGAGTATGGCACCCCGCTTCTTGATCTTGATGAGTTCGATATCGCCAGTATTCCAGAAGAC
TTCCTTAACAAGAAACTGATCGAGAAGCACAAGTGTTTGCCCCTATTTAAACGAGGAAATCGCCTCTATATTGGTACTTC
TGATCCCACAAATATTGCCGCTTTAGAAGATTTTCAGTTCAGTGCAGGTTTGCATGCTGAAGCCATTCTAGTTGAAGATG
ATAAACTCACTAAAGCCTTAGAAAAAGTTTTGGAGGAGGATATATCCGCACTGGATATTGGCGGCATAGATGAAGATGCA
CTAGCCGGTATTGAAGTTGAAGATACCAGTAAGCGCGATGACGATCAAAATGGGGAGAGTGGTGATGATGCCCCTATCGT
TATCTACATCAATAAAATCCTTACCGATGCTATCCGCAAAGGAGCCTCAGATCTCCACTTCGAGCCTTATGAAAAACGTT
ACCGCATCCGCTTTCGTATTGATGGCATACTCCATGAGGTGTCTGAGCCACCAGTCAATTTATCTGGTCGAATATCAGCC
CGTTTAAAGGTGATGTCTAAGCTAGATATTGCAGAGCGACGTGTACCACAAGATGGCCGCATTAAGATGAAGCTTTCACG
CACAAAGTCTATTGATTTTCGTGTGAGCACCCTCCCCACTATCTGGGGTGAAAAGATAGTGATGCGTATTCTCGACTCCT
CTTCGGCGCAACTTGGCATTGAGAAATTGGGCTATGAGGATGATCAGCGAGAGCTTTATGAAGAGATGCTCTCTAAACCT
CAAGGGATGATCCTAGTCACAGGCCCTACTGGCTCTGGTAAAACCGTCTCCCTCTATACTGGCCTTAATATATTAAATAC
CGAAGAGCGTAATATCTCAACAGCTGAAGATCCAGTCGAGATAAACCTTGAAGGTGTAAACCAAGTTCATATCAACCTAA
AAGCTGGGCTAACTTTCGCCTCGGCGCTACGCTCATTCTTACGTCAAGATCCCGATGTGGTGATGGTGGGTGAGATCCGT
GATTTAGAAACCGCAGAGATAGCCATTAAAGCCGCTCAAACAGGACACTTGGTACTCTCAACTCTGCATACAAACTCGGC
AGCTGAAACACTCACTCGACTAATTAATATGGGCGTTCCAGGATATAACATTGCCAGCTCAGTTAATCTTATTATTGCTC
AACGCTTAGCACGTAGACTCTGCCCTGAGTGTAAACAGCCAGAAAATGTCCCTGAACATGAACTTCAAAAGCTCGGCTTT
CCACAAACAGCAATCGATAAAGGAATTACCACATATAAACCTATTGGTTGTGACTTGTGCTCCGGAGGTTATAAAGGTCG
AGTGGGGATCTATGAAGTAATGAAGATGTCAGATGAGATAGCCCGTACTATTATGGAGGGAGGTAACTCATTGCAGATTG
CTAATCAAGCTAAAACTCAAGGTATGCGAGACTTGCGAGGCTCAGGGCTACTCAAAGTCATTCAAGGCGTGACTAGCATT
ACAGAGATCAACCGCGTCACTAGCTTTTAG

Upstream 100 bases:

>100_bases
CGGAGCTGGAATATAAGAATTTAGTTTCAATGTACACACAGCAGTGCAAACTGAAGTTAGTACTGCTGTGCTGTAGAATT
TCCTTTACTAAGGTTACAGT

Downstream 100 bases:

>100_bases
GCTCACAGTAATAATCTAACTTCCTATATATCTAAGTAGCAAAGGAATGAACCATGGCCACGGCAACAGCAAGCAAAAAA
ACCAATAAAAAAACAGCTAA

Product: type IV-A pilus assembly ATPase PilB

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>569_residues
MPTTGLHLGLSTLFIRKNLLTEEQIASSIAKSRQSKQSLVSTVISEKLISAREIAELCYEEYGTPLLDLDEFDIASIPED
FLNKKLIEKHKCLPLFKRGNRLYIGTSDPTNIAALEDFQFSAGLHAEAILVEDDKLTKALEKVLEEDISALDIGGIDEDA
LAGIEVEDTSKRDDDQNGESGDDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPVNLSGRISA
RLKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSTLPTIWGEKIVMRILDSSSAQLGIEKLGYEDDQRELYEEMLSKP
QGMILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVEINLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIR
DLETAEIAIKAAQTGHLVLSTLHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCPECKQPENVPEHELQKLGF
PQTAIDKGITTYKPIGCDLCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIANQAKTQGMRDLRGSGLLKVIQGVTSI
TEINRVTSF

Sequences:
NA

Specific function: NA

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA