| Definition | Shewanella woodyi ATCC 51908 chromosome, complete genome. |
|---|---|
| Accession | NC_010506 |
| Length | 5,935,403 |
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Identifier: 170724584
GI number:
Start: 265854
End: 267944
Strand: Reverse
Name: Not Available
Synonym: Swoo_0214
Alternate gene names: NA
Gene position: NA
Preceding gene: 170724585
Following gene: 170724583
Centisome position: NA
GC content: NA
Gene sequence:
>2091_bases ATGAATAATCCTCTTTGTCATGTCCGTTATCTGTGCATAGAAACCGGTATTCAACTTAACGTCACCGATAATAATACCTT AGCCGTCATTGAAATTAACTCTCCTCCAGTCAATGCGATTTCTCAACAACTTAGAGCTGAGTTATTGATTCTATTCCAAT CCCTGGCTTCACAAGATTTACACTCAGTTTTACTCACCTGCACAGGTCGTACTTTTGTAGCAGGTGCCGATATAAAAGAG ATGGACACAGAGCCACTTGAGCCACACCTTCCTGAGTTGATAGCCACTATAGTCCGCTTCCCAAAACCCGTTATTGCCGC TCTACATGGCACAGTACTCGGTGGAGGGTTGGAACTCGCCCTAGCTTGCGATTACCGTCTAGCAGTCAGCAAGACTAAAC TGGGATTGCCTGAAGTGAATTTAGGTATTATTCCTGGTGCGGGTGGCACCTTGAGGCTAATGAATTTAATTGGCGTTAAA GCTGCCATCGAATTTGCGTGTACAGGCAAACCTCAAAATGCGGATGAGTGGCTAAATACGGCGTTAATTCATAAGCTGGT GCACAAAGGTGATCTCACAGAGCAAGCCTTAAGCTTTTGTCGACAGCTGACGCTAACAGAAAGCAAGCAAAACACTGAGG CCGACTTCTCAATTCAAGGACAATATATTGATTGGGATAGCACAGAGAAAAGAGTTAAACGTCTCGCAAAAGGAGTTGAA GCACCTGCACTATTACTCAATGAAATCAAAGCAATATATAGCTTAGGTTTATCTTTTGAACATGCACTGAAACGTCAACG TCGTTTATTTTTACAATTGCGCGACTCAGACCAAGCCAAAGCACTTCGGTATGCTTTTTTTACCGAGAAAAAGAACCAAA AACTGGCAACTTCAACATCATCCACCAGAACTATAAATACCGTCGGAGTCGTGGGCGCTGGTAACATGGGTGTAGGGATC GCTCGCTGTTTTATCGATGCTGGCATGGACTTGATATGGATAGAGCAAACCGAAGAAGCCTTGCTACGAGGCATGGATAA TTTACGCAAAGGCTACCAGTCAAAAATAACAAAAGGACACATGACTGAGCAAGATCTAGATGACAAGATGCAGCTAGTAA AAGGAAGTACTGTCTACGACCGTTTAGCACCTTGCGATCTGGTCGTTGAGGCTGCATTTGAAGATTTAGAAGTAAAAAAA ATCATTTTCAAAGCTCTTGATCAACACTGCAAAGATAGCGCGATTCTAGCGACTAACACCTCATATCTGGATATTAATAG CATTGCCAAAGTGACCAGTAGGCCTGATCAAGTAGTCGGTTTGCACTTTTTTAGTCCAGCCCATGTAATGAAATTAATCG AAATAGTTAGAGCAGAGAACACTGCCGATGACGTGATTAAAACCATGTTGGCACTCGGTGTAAAACTTAGAAAATACCCC GTTGAAGTAGGCGTATGCTTTGGATTTGCAGCCAATCGCATGTACACTCGCTATGGACGCGAAATTCAACAGATGTTACT CGAAGGTAACAGCATAGTGGCGATAGATGAAGCCATGACCTCTTTTGGAATGGCCATGGGTCCTTTAACTGTACAAGATC TCAGTGGGATAGATATTGGGTATCAAGCAAGAGCAAAACAAGCTGATAAACCCTATGATCTTGGTTATTTTAGGCCCTCT GCATCCATGGTTGAAAATGGACGTTTGGGCCGAAAAACTCAGGCAGGCTTTTACCAATATTTAGCCTCTGGTGAGAAGGT AGAGTCACAAGAAGCTCAGTTATTAGTGGATAACGAAGCAAAAAAACTCTCAATAATCCCACATCGGTTAACAGCCGAGG CAATCCAACAAAGGGCGATGTTAGCTCTGGTGAGCGAAGGTTTGCTTATCATTGATGAGGGAATTGTAAATGATATCAGT TTACTCGATATCATCTGGCTACATGGCTATGGCTTTCCTCGCTTTAAAGGAGGACCTATGTACTGGGGCGCAAAATTAGG CTGTGCAGACATTGATGAAAAACTGCAATTATTACGACACCAATACAGTGCAGATATTTGGCCTGAAGTCACCCTAAGTA ACTTAAAATAA
Upstream 100 bases:
>100_bases TTCAAACAAGCTGGTTCTATCGTACTTGCTGACATTATCAATTTTACCAATGTCACTCCGATTATCGTTGTTAGTGAGAT AACAATAATGGGAGGTTCAC
Downstream 100 bases:
>100_bases TATACAAACTTTCACGAGGTTATTTATTCGATAATTAGATGAATAGCCTCAACTTTATATATTACTCTCGTCACTGTTTT AAATGACCTGTTATTTCTCC
Product: 3-hydroxyacyl-CoA dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>696_residues MNNPLCHVRYLCIETGIQLNVTDNNTLAVIEINSPPVNAISQQLRAELLILFQSLASQDLHSVLLTCTGRTFVAGADIKE MDTEPLEPHLPELIATIVRFPKPVIAALHGTVLGGGLELALACDYRLAVSKTKLGLPEVNLGIIPGAGGTLRLMNLIGVK AAIEFACTGKPQNADEWLNTALIHKLVHKGDLTEQALSFCRQLTLTESKQNTEADFSIQGQYIDWDSTEKRVKRLAKGVE APALLLNEIKAIYSLGLSFEHALKRQRRLFLQLRDSDQAKALRYAFFTEKKNQKLATSTSSTRTINTVGVVGAGNMGVGI ARCFIDAGMDLIWIEQTEEALLRGMDNLRKGYQSKITKGHMTEQDLDDKMQLVKGSTVYDRLAPCDLVVEAAFEDLEVKK IIFKALDQHCKDSAILATNTSYLDINSIAKVTSRPDQVVGLHFFSPAHVMKLIEIVRAENTADDVIKTMLALGVKLRKYP VEVGVCFGFAANRMYTRYGREIQQMLLEGNSIVAIDEAMTSFGMAMGPLTVQDLSGIDIGYQARAKQADKPYDLGYFRPS ASMVENGRLGRKTQAGFYQYLASGEKVESQEAQLLVDNEAKKLSIIPHRLTAEAIQQRAMLALVSEGLLIIDEGIVNDIS LLDIIWLHGYGFPRFKGGPMYWGAKLGCADIDEKLQLLRHQYSADIWPEVTLSNLK
Sequences:
NA
Specific function: NA
COG id: COG1250
COG function: function code I; 3-hydroxyacyl-CoA dehydrogenase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA