Definition Pseudomonas putida W619 chromosome, complete genome.
Accession NC_010501
Length 5,774,330

Click here to switch to the map view.

The map label for this gene is xseA

Identifier: 170723358

GI number:

Start: 4627790

End: 4629181

Strand: Direct

Name: xseA

Synonym: PputW619_4197

Alternate gene names: NA

Gene position: NA

Preceding gene: 170723351

Following gene: 170723359

Centisome position: NA

GC content: NA

Gene sequence:

>1392_bases
ATGATGCCCGGCATGATCAGAGACCCCTTCGAACGACTCGGCCTGGACCGCGAGGTCCTCACCGTCAGCCAGCTCAACGG
CCGCGCCCGTGTGCTGCTGGAAGACGTGTTCCGCAGCGTCTGGGTGGAAGGCGAGATATCCAACCTCGCCCGCCCGGCCT
CCGGCCACATGTACTTCACCCTCAAGGACAGTGGCGCTCAGGTGCGCTGCGCGCTGTTCCGGCAGAACGCCACACGTGTC
CGCCAGGCTCTGCGTGATGGCCTGGCAGTGCGTGTGCGCGGCAAGGTCTCGCTGTTCGAAGGCCGCGGCGACTACCAACT
GATTCTCGACACCGTTGAACCAGCCGGTGACGGCGCCCTGCGCCTGGCATTCGAGGCGCTGAAGGAAAAGCTCGGCGCCG
AGGGCCTGTTCAGCGCCGAACGCAAGAGGCCGCTGCCCGCCCACCCGCAGCGCATCGGTATCATCAGTTCGCCCACCGGC
GCGGTCATCCGCGACATCATCAGCGTGTTCGGCCGCCGCGCCCCGCAGGTCGAACTGAACCTGGTCCCCACAGCGGTACA
GGGCCGCGAAGCCATTGCGCAGATCGTGCGCGCCATCCGCCTGGCCGACAGCCTCGGTTTCGATGCCCTGATCCTGGCCC
GTGGCGGCGGGTCGCTGGAAGACCTGTGGTGCTTCAACGAAGAAGCCGTAGCGCGTGCAATAGCGGCCTGCGTCACGCCG
ATCGTCAGCGCTGTGGGCCATGAGACCGACGTATCGATCAGCGATTTTGTCGCCGATGTCCGCGCCCCTACGCCCTCTGC
CGCCGCCGAGCTACTGGCCCCCGACAGCAGCGGGCTGCAGCAGCGCCTTGAAGGATTGCAGCGGCGCCTGCTGCTACGCA
TGCAGAACCGCCTGGCCCACGATCGCCTGCGCCTGGAATCGCTGACCCGGCGCCTGCGCCACCCCGGCGAGCGCTTGCGC
CAGCAGGCCCAGCGCCTGGACGACCTGGACATGCGCCTGCGCCGCGCCTTCCTGCAGAGCCTCAACCAGCGCCGCGAACG
CCTGGCGCGCCTCGACACACGCCTGGCCGCGCAGCATCCGGGGCGTACGCTGAAACTGCTCAGCCAACGCCTGGACAGCC
TCGCCGAGCGGCTGCCGCGGGCCATGCGCGAGGTGCTCAAAGACCGCCGCCAGCGCTTTCAGGCCCAGTTGCAGACGCTG
CAGGTGGTTAGCCCGCTGGCGACCCTGGCACGCGGCTACAGCATCCTTCTCGATGAGCGTGGCCAGGCCATACGCAGTGC
CGAGCAAACCCGCAATGGCCAGCGCCTGACTGCCCGCCTGAATGAAGGCGAATTGCAGGTGCGGGTCGAGGACAACCACC
TGACTCCGGTCACCCTTTCCCTACTGGACTGA

Upstream 100 bases:

>100_bases
CGATTTCCGGTGATAGACCGGCACAGGGTAGCCTGTTCTGGCCTCAGCGCCGGCTTGCCAGCGATGAGGCCAGAACAGAC
AACCAGGCATCGAGTCATTT

Downstream 100 bases:

>100_bases
CACATGCCCCGCCTGTTCGCCCCTCTGCTTGCCCTATCCCTGTTGTTGCTGGCCGGCGGTGCCCAGGCCAGCTACATCAC
CCGCACTCTGAACAAGCCCG

Product: exodeoxyribonuclease VII large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>463_residues
MMPGMIRDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFTLKDSGAQVRCALFRQNATRV
RQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFEALKEKLGAEGLFSAERKRPLPAHPQRIGIISSPTG
AVIRDIISVFGRRAPQVELNLVPTAVQGREAIAQIVRAIRLADSLGFDALILARGGGSLEDLWCFNEEAVARAIAACVTP
IVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSGLQQRLEGLQRRLLLRMQNRLAHDRLRLESLTRRLRHPGERLR
QQAQRLDDLDMRLRRAFLQSLNQRRERLARLDTRLAAQHPGRTLKLLSQRLDSLAERLPRAMREVLKDRRQRFQAQLQTL
QVVSPLATLARGYSILLDERGQAIRSAEQTRNGQRLTARLNEGELQVRVEDNHLTPVTLSLLD

Sequences:
NA

Specific function: NA

COG id: COG1570

COG function: function code L; Exonuclease VII, large subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA