| Definition | Pseudomonas putida W619 chromosome, complete genome. |
|---|---|
| Accession | NC_010501 |
| Length | 5,774,330 |
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Identifier: 170720851
GI number:
Start: 1850045
End: 1853494
Strand: Reverse
Name: Not Available
Synonym: PputW619_1665
Alternate gene names: NA
Gene position: NA
Preceding gene: 170720855
Following gene: 170720850
Centisome position: NA
GC content: NA
Gene sequence:
>3450_bases GTGTCAGTTCTGCGCCTACCGCAAATGTCGGCCACGGCCGGCAAACAAACCTGGGGCAACCTGCCCGGTGCCGCCCTCAG CCTTGCCATCGCCGAGGCCGCCAGCAGTGCTGGCCGCTTCACCCTGCTGCTGACCGCCGACAGCCAGGCTGCCGACCGTC TGGAGCAGGAGCTGCGCTTCTTTGCACCCGGCCTACCGGTGCTGCCGTTCCCGGACTGGGAAACCCTGCCCTACGACCTG TTCTCACCACACCAGGACATCATTTCCCAGCGCATCGCCAGCCTCTACCGGCTGCCAGAGTTGAGCCATGGCATCCTCGT GGTGCCGATCACCACGGCCTTACACCGTCTGGCCCCAACGCGCTTCCTGCTCGGCAGCAGCCTGGTGCTGGATGTCGGCC AGACGATCGACGTAGAACAGATGCGCTCACGGCTGGAGGCCACTGGCTACCGCTGCGTCGACACGGTCTACGAGCATGGC GAGTTCGCCGTGCGCGGCGCGCTGATCGACCTGTTCCCGATGGGCAGCAAGCTGCCCTACCGTATCGACCTGTTCGACGA CGAGATCGAGACCCTGCGTACCTTCGACCCGGAGACCCAGCGCTCGATCGACAAGGTCGACTCGATCCGTCTGCTGCCGG CACGCGAATTCCCCATGCAGAAAGAGGAAGTGACGCGCTTCAAGGCACGCTTCCGAGAACGTTTCGATGTCGACTTCCGC CGCAGCGCGATCTTCCAGGACCTGGCCAGCGGCATCATCCCCGCCGGGATCGAGTACTACCTGCCGCTGTTCTTCGAAGA AACCTCGACACTGTTCGACTACCTGCCAAGCGACACCCAGGTGTTCTCGCTGCCGGGCGTCGAGCAGGCTGCCGAGCACT TCTGGAACGACGTGCGCGGGCGTTACGAAGACCGCCGCGGCGACCTGAGCCGTCCACTGCTGCCGCCTTCTGAACTGTTC CTGCCAGTGGAGGACTGCTTCGCCCAGCTTAAACAGTGGCCGCGCGTGGTGGTCAGTGCCGAGGATGTCGAGCCTGGCGT CGGCCGCGAGCGCTTTCCCGCCCGCACCCTGCCCAACCTGGCCATCGAAGCCAAGGCCAACCAGCCGCTGGCGGCGCTGT CCGACTTCCTCGACCAGTTCAGCGGCCGGGTGCTGTTCACCGCCGAATCGGCGGGCCGTCGCGAGGTGCTGCTGGAGCTG CTCGAGCGCCTCAAGCTGAGGCCACACACAGTCGAGGGCTGGGCGGACTTCATCACTGGCAGCCAGCGCCTGGCGATCAC CATCGCCCCGCTGGACGAAGGCCTGCTACTCGAAGACCCGGCCATCGCCCTGGTCGCCGAAAGCCCGCTGTTCGGGCAGC GCGTGATGCAGCGCCGGCGCCGCGACAAGCGCGGCGAGGCCGCCAATGATGCGGTGATCAAAAACCTTACCGAACTGCGT GAAGGCGCGCCGGTGGTGCACATCGACCATGGCGTGGGCCGCTATCTGGGCCTGGCCACGCTGGAGATCGACGGCCAGGC CGCCGAGTTCCTGACCCTGGAATACGCCGAGGGCGCCAAGCTTTACGTCCCGGTGGCCAACCTGCACCTGATTGCCCGCT ACACCGGCAGCGATGACGCCCTGGCGCCGCTGCACCGGCTCGGCTCGGAAGCCTGGCAGAAGGCCAAGCGCAAAGCCGCC GAACAGGTCCGCGACGTGGCCGCCGAGCTGCTCGACATCTACGCCCGCCGAGCCGCGCGCAAGGGTTACGCATTCGCCGA CCCGGCTGCCGACTATGCCACCTTCAGCGCCGGCTTCCCCTTCGAGGAAACCCCCGACCAGCAGAACGCCATCGAAGCGG TGCGCGCCGACATGCTCGCCGCCAAGCCGATGGACCGCCTGGTGTGCGGCGACGTCGGCTTCGGCAAGACCGAGGTCGCC ATGCGCGCGGCTTTCATCGCCGTGCACAGCGGCCGCCAGGTAGCGGTGCTGGTGCCTACCACCCTGCTTGCCCAGCAGCA CTACAACAGCTTCCGCGACCGCTTCGCCGACTGGCCGGTAACGGTCGAGGTGATGAGCCGCTTCAAATCGGCCAAGGAAG TGGCCAGCGCCGCAGCGGACCTGGCCGAAGGCAAGATCGACATCCTGATCGGCACGCACAAACTGCTGCAGGACGATGTG CGCTTCAAGGACCTGGGCCTGGTGGTAATCGACGAAGAGCACCGCTTTGGCGTACGCCAGAAGGAACAGCTCAAGGCCCT GCGCAGCGAGGTGGACATCCTCACCCTGACCGCCACACCGATTCCGCGAACGCTGAACATGGCCGTGGCCGGCATGCGTG ACCTGTCCATCATCGCCACACCGCCGGCACGGCGCCTGTCGGTGCGCACCTTCGTCATGGAGCAGAACAACAGTACGGTA AAAGAAGCACTACTGCGTGAACTGCTACGCGGCGGCCAGGTGTACTACCTGCACAACGATGTGAAAACCATCGAAAAATG CGCCGCAGACCTTGCCGAACTGGTGCCTGAAGCGCGTATCGGCATCGGCCACGGGCAGATGCGCGAGCGCGAACTGGAAC AGGTGATGAGCGACTTCTATCACAAGCGCTTCAACGTGCTGATCGCCTCGACCATCATCGAGACCGGCATCGACGTGCCC AGCGCCAACACCATCGTCATCGAGCGCGCGGACAAGTTCGGCCTGGCCCAATTGCACCAGTTGCGTGGCCGGGTCGGCCG CAGCCACCACCAGGCCTATGCCTACCTGCTGACACCGGCGCGGCAGAAAGTGAGCGCCGACGCCGAGAAACGCCTGGAAG CCATTGCCAACACCCAGGACCTGGGCGCCGGCTTCGTGCTGGCCACCAACGACCTGGAAATCCGCGGCGCCGGCGAGCTG CTGGGCGAAGGCCAGAGCGGGCAGATCCAGGCCGTGGGCTTTACCCTTTACATGGAAATGCTCGAACGGGCGGTCAAGGC CATTCGCAAGGGCACACAGCCGAACCTGGAACAGCCGCTGGGCGGTGGCCCGGAAATCAACCTGCGCCTGCCGGCACTGA TCCCCGAGGATTACCTGCCCGACGTACATGCGCGGCTGATCCTCTACAAACGCATCGCCTCGGCAGCTGACGAGGAGGGT CTCAAGGACCTGCAGGTGGAGATGATCGACCGCTTCGGCCTGCTGCCCGAGCCGACCAAGAACCTGATGCGCCTGACCCA GCTCAAGCTTCAGGCGGAAAAGCTCGGCATCAAGAAAGTCGATGCCGGCCCGAACGGCGGCAAGCTCGAGTTCGAGGCCG AAACCCCAGTCGACCCGCTGACCCTGATCAAGCTGATCCAGGGCCAGCCAAAACGCTACAAGTTCGAAGGCGCAACCCAG TTCCGCTTCCTGGTACCGATGGAACGGCCCGACGAACGCTTCAACACTCTGGAGGCGCTGTTCGAGCGCCTGACCCCACA GACAGCCTAA
Upstream 100 bases:
>100_bases GGAGCCAAAGCCCGTGCTCATGCCCTTTCCGAGCCTGACAGCACGCACCGGCACCGGTACAATCGGTCTCTTTGCCGCAA CGCTTGGAGTGCAATCTCCC
Downstream 100 bases:
>100_bases GGAAGATCCATGCGTGCCATCCGTTGCCTGACCTTGTTGCTTGCGCTGTTCGCGCCGGCCGCCTTCGCTGAAGGTCTTTA TCAGGTGGAAATGATCCTTG
Product: transcription-repair coupling factor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1149_residues MSVLRLPQMSATAGKQTWGNLPGAALSLAIAEAASSAGRFTLLLTADSQAADRLEQELRFFAPGLPVLPFPDWETLPYDL FSPHQDIISQRIASLYRLPELSHGILVVPITTALHRLAPTRFLLGSSLVLDVGQTIDVEQMRSRLEATGYRCVDTVYEHG EFAVRGALIDLFPMGSKLPYRIDLFDDEIETLRTFDPETQRSIDKVDSIRLLPAREFPMQKEEVTRFKARFRERFDVDFR RSAIFQDLASGIIPAGIEYYLPLFFEETSTLFDYLPSDTQVFSLPGVEQAAEHFWNDVRGRYEDRRGDLSRPLLPPSELF LPVEDCFAQLKQWPRVVVSAEDVEPGVGRERFPARTLPNLAIEAKANQPLAALSDFLDQFSGRVLFTAESAGRREVLLEL LERLKLRPHTVEGWADFITGSQRLAITIAPLDEGLLLEDPAIALVAESPLFGQRVMQRRRRDKRGEAANDAVIKNLTELR EGAPVVHIDHGVGRYLGLATLEIDGQAAEFLTLEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSEAWQKAKRKAA EQVRDVAAELLDIYARRAARKGYAFADPAADYATFSAGFPFEETPDQQNAIEAVRADMLAAKPMDRLVCGDVGFGKTEVA MRAAFIAVHSGRQVAVLVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSAKEVASAAADLAEGKIDILIGTHKLLQDDV RFKDLGLVVIDEEHRFGVRQKEQLKALRSEVDILTLTATPIPRTLNMAVAGMRDLSIIATPPARRLSVRTFVMEQNNSTV KEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRERELEQVMSDFYHKRFNVLIASTIIETGIDVP SANTIVIERADKFGLAQLHQLRGRVGRSHHQAYAYLLTPARQKVSADAEKRLEAIANTQDLGAGFVLATNDLEIRGAGEL LGEGQSGQIQAVGFTLYMEMLERAVKAIRKGTQPNLEQPLGGGPEINLRLPALIPEDYLPDVHARLILYKRIASAADEEG LKDLQVEMIDRFGLLPEPTKNLMRLTQLKLQAEKLGIKKVDAGPNGGKLEFEAETPVDPLTLIKLIQGQPKRYKFEGATQ FRFLVPMERPDERFNTLEALFERLTPQTA
Sequences:
NA
Specific function: NA
COG id: COG1197
COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA