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The map label for this gene is ydfD [H]

Identifier: 170684084

GI number: 170684084

Start: 1177373

End: 1177564

Strand: Reverse

Name: ydfD [H]

Synonym: EcSMS35_1153

Alternate gene names: 170684084

Gene position: 1177564-1177373 (Counterclockwise)

Preceding gene: 170680399

Following gene: 170684076

Centisome position: 23.23

GC content: 42.19

Gene sequence:

>192_bases
ATGAATCCAGTATTTGCACTTATTCTGACGGTTTTTCTTGTTTCCGGAGGGCCAGTTGATATTGCAGTCAGTGTTCACAG
AACAAAGCAGGAATGTATGGCAGCAGCAACCGAACAGAAAATTCCAGGCAACTGTTATCCGGTCGATAAAGTTATTCACC
AGGATAATAACGAAATCCCGGCAGGATTTTAA

Upstream 100 bases:

>100_bases
ATGCCATTAACAAAAGAAAACACGAACGGGAGTTATTAAATAAAGTATGCATTGTTTCAATGCTGGCCCGTTTACGTCTG
ATGCCAAAAGGATGTGCACA

Downstream 100 bases:

>100_bases
AACAGCACCGTAATAAATATCCAGTTTCATTCTTATATGTCAGCAATGGCAGAGATTTGTTCACCCTTAAATCTGTGATG
AGGTTTACCAATAATGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MNPVFALILTVFLVSGGPVDIAVSVHRTKQECMAAATEQKIPGNCYPVDKVIHQDNNEIPAGF

Sequences:

>Translated_63_residues
MNPVFALILTVFLVSGGPVDIAVSVHRTKQECMAAATEQKIPGNCYPVDKVIHQDNNEIPAGF
>Mature_63_residues
MNPVFALILTVFLVSGGPVDIAVSVHRTKQECMAAATEQKIPGNCYPVDKVIHQDNNEIPAGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787858, Length=63, Percent_Identity=85.7142857142857, Blast_Score=114, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009954 [H]

Pfam domain/function: PF07358 DUF1482 [H]

EC number: NA

Molecular weight: Translated: 6796; Mature: 6796

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVFALILTVFLVSGGPVDIAVSVHRTKQECMAAATEQKIPGNCYPVDKVIHQDNNEIP
CCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
AGF
CCC
>Mature Secondary Structure
MNPVFALILTVFLVSGGPVDIAVSVHRTKQECMAAATEQKIPGNCYPVDKVIHQDNNEIP
CCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
AGF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3041373; 9097039; 9278503 [H]