| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is 170684029
Identifier: 170684029
GI number: 170684029
Start: 4283449
End: 4284297
Strand: Reverse
Name: 170684029
Synonym: EcSMS35_4185
Alternate gene names: NA
Gene position: 4284297-4283449 (Counterclockwise)
Preceding gene: 170683494
Following gene: 170679716
Centisome position: 84.53
GC content: 32.86
Gene sequence:
>849_bases ATGAACAACATATTAGGCTCATCAATTAATATGCCCTGTACACTTTTCGAAACTATTACTTTATTCGATGATTTTTCTGC TGATGATATGCAGTATGGGGATATGGAAGAACAAGATTTTCTCTCACTCGGCTTAAGCGACATCTCTGCAAAAGTTGATC CTTACCGCCTCATTAAATACCATTTTCCTGGGCCGAATTCTACTTATGGTGCTTTTAGTGTTCCAACTTCTGGAACAAAA ATATCACAAAGTGAATGTATTGATATTTTATTTGCAGAAATGAAAGATCTGGCAAAAATGTTTTCCTTTTTTGGACAATA CAAAACACTCATCCAGGATCTGATTGATCATTTTAGATATGGAAATGGCAACAGTTTCCATAGCCAGGAATTGAACTTAT CTTTTCATGAACGAATAAACAAATATGATTATAATAGCCCAATACGTGTAATCAAAGAATGTATCGAAAATGATATTTCT TCAACACCTACGATAGGATACCGGCCTCTTCTCCTACAAAAGATTAAGACCGAATTACTTTCATCAAGACTAAATAAATT CAATGATTTTAAAGATAATTTTAATGGCATGGGAATCAGCATTCATGATATCTCAGCTCAAAAAATATCTCTTTTAAATT TTCAAAAATATCCTATGGGCTGGAGCGCTACCATTCATTTCATAGCACAAGACCACTTTGGTTTGGATGTGACTGATATA AAAAACAAGATTTACAACAAGTATAGATTTTTTCGCATATGGTTCTTTTTACAACGGCATAAAGACTTTGCTTTCAAACC TTTTTTCACCAATTTTAACACTATCGAAAGAATCGAAAATTATCTATGA
Upstream 100 bases:
>100_bases GTAATGAAAAATGTGAAGTGCATTTCTTTTTTAAAATTTTTTACCCTATTATTTCTTATCAAATTAACATTGCCCTTAAT TATAAGAAAGGAGAATATAA
Downstream 100 bases:
>100_bases AAAGAAAACTCCAGAAAATTATATTATATTTATTTCTTCTATGCTGCATCTATAATTTATGGACATTGCGTCCTGTACAG ATTTTGTATACATACTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MNNILGSSINMPCTLFETITLFDDFSADDMQYGDMEEQDFLSLGLSDISAKVDPYRLIKYHFPGPNSTYGAFSVPTSGTK ISQSECIDILFAEMKDLAKMFSFFGQYKTLIQDLIDHFRYGNGNSFHSQELNLSFHERINKYDYNSPIRVIKECIENDIS STPTIGYRPLLLQKIKTELLSSRLNKFNDFKDNFNGMGISIHDISAQKISLLNFQKYPMGWSATIHFIAQDHFGLDVTDI KNKIYNKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL
Sequences:
>Translated_282_residues MNNILGSSINMPCTLFETITLFDDFSADDMQYGDMEEQDFLSLGLSDISAKVDPYRLIKYHFPGPNSTYGAFSVPTSGTK ISQSECIDILFAEMKDLAKMFSFFGQYKTLIQDLIDHFRYGNGNSFHSQELNLSFHERINKYDYNSPIRVIKECIENDIS STPTIGYRPLLLQKIKTELLSSRLNKFNDFKDNFNGMGISIHDISAQKISLLNFQKYPMGWSATIHFIAQDHFGLDVTDI KNKIYNKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL >Mature_282_residues MNNILGSSINMPCTLFETITLFDDFSADDMQYGDMEEQDFLSLGLSDISAKVDPYRLIKYHFPGPNSTYGAFSVPTSGTK ISQSECIDILFAEMKDLAKMFSFFGQYKTLIQDLIDHFRYGNGNSFHSQELNLSFHERINKYDYNSPIRVIKECIENDIS STPTIGYRPLLLQKIKTELLSSRLNKFNDFKDNFNGMGISIHDISAQKISLLNFQKYPMGWSATIHFIAQDHFGLDVTDI KNKIYNKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32940; Mature: 32940
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNILGSSINMPCTLFETITLFDDFSADDMQYGDMEEQDFLSLGLSDISAKVDPYRLIKY CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHCCCCCEEEEEE HFPGPNSTYGAFSVPTSGTKISQSECIDILFAEMKDLAKMFSFFGQYKTLIQDLIDHFRY ECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNGNSFHSQELNLSFHERINKYDYNSPIRVIKECIENDISSTPTIGYRPLLLQKIKTELL CCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH SSRLNKFNDFKDNFNGMGISIHDISAQKISLLNFQKYPMGWSATIHFIAQDHFGLDVTDI HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCHHHEEEEEECCCCCCCHHHH KNKIYNKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MNNILGSSINMPCTLFETITLFDDFSADDMQYGDMEEQDFLSLGLSDISAKVDPYRLIKY CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCHHHHHCCCCCEEEEEE HFPGPNSTYGAFSVPTSGTKISQSECIDILFAEMKDLAKMFSFFGQYKTLIQDLIDHFRY ECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GNGNSFHSQELNLSFHERINKYDYNSPIRVIKECIENDISSTPTIGYRPLLLQKIKTELL CCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH SSRLNKFNDFKDNFNGMGISIHDISAQKISLLNFQKYPMGWSATIHFIAQDHFGLDVTDI HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHCCCCCCCCHHHEEEEEECCCCCCCHHHH KNKIYNKYRFFRIWFFLQRHKDFAFKPFFTNFNTIERIENYL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA