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The map label for this gene is ybhK [H]

Identifier: 170683940

GI number: 170683940

Start: 807433

End: 808341

Strand: Reverse

Name: ybhK [H]

Synonym: EcSMS35_0803

Alternate gene names: 170683940

Gene position: 808341-807433 (Counterclockwise)

Preceding gene: 170682288

Following gene: 170679840

Centisome position: 15.95

GC content: 51.27

Gene sequence:

>909_bases
ATGCGCAATCGTACGCTGGCTGACCTTGATCGTGTCGTTGCTCTCGGCGGAGGGCATGGACTGGGACGCGTTCTCTCATC
ACTTTCGTCTTTGGGTTCTCGTTTAACGGGTATCGTCACCACCACGGATAATGGTGGCTCGACGGGGCGTATTCGCCGCT
CAGAAGGCGGTATTGCCTGGGGCGATATGCGTAACTGCCTCAACCAGCTGATAACTGAACCCAGCGTCGCTTCCGCAATG
TTTGAATATCGTTTCGGCGGTAATGGCGAACTTTCCGGGCACAACCTTGGAAACCTGATGCTGAAGGCACTGGATCACCT
TAGCGTGCGACCTCTTGAAGCGATCAATCTGATTCGCAATCTGCTGAAAGTGGACGCACATTTGATTCCGATGTCGGAGC
ATCCTGTTGATCTGATGGCGATTGACGATCAGGGGCATGAAGTTTACGGCGAGGTCAATATCGACCAGTTAACTGCGCCG
ATTCAAGAGTTATTGTTAACGCCGAATGTACCCGCAACGCGTGAGGCGGTTCACGCTATCAGTGAAGCGGATCTCATCAT
TATTGGGCCTGGCAGTTTTTACACCAGCCTGATGCCAATTCTGCTGCTGAATGAAATCGCACAAGCATTACGCCGCACGC
CAGCGCCGATGGTCTATATCGGCAATCTGGGGCGTGAGTTGAGTTTACCTGCGGCTAATTTGAAGCTGGAAAGCAAGCTG
GCAATTATGGAGCAGTATGTCGGTAAAAAAGTGATTGATGCGGTAGTTGTTGGGCCGAAAGCTGATGTATCCGCAGTTAA
CAACAGAATTGTGATTCAGGAAGTACTGGAGGCCAGCGATATCCCCTATCGTCATGACCGCCAGTTGTTACATAACGCGC
TGGAAAAGGCATTACAGGCTTTAGGTTAA

Upstream 100 bases:

>100_bases
TAGAAGAAAATAGTTTGTATCCTCAATATTGGCAGGTTAATTGCTGTTTCCCCGCAATTTGCGCTACTGTAGCGCGGATA
ATCTGACTCCAGGAAACTAT

Downstream 100 bases:

>100_bases
CACGAAGCCGGAAGAATATTCCGGCTTCGTCATCTTGTCACGACGCGGCAATAAACAGCTCACGCAGCTGATGCAACTGG
TCACGAATTTGCGCCGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAM
FEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDAHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTAP
IQELLLTPNVPATREAVHAISEADLIIIGPGSFYTSLMPILLLNEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL
AIMEQYVGKKVIDAVVVGPKADVSAVNNRIVIQEVLEASDIPYRHDRQLLHNALEKALQALG

Sequences:

>Translated_302_residues
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAM
FEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDAHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTAP
IQELLLTPNVPATREAVHAISEADLIIIGPGSFYTSLMPILLLNEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL
AIMEQYVGKKVIDAVVVGPKADVSAVNNRIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>Mature_302_residues
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAM
FEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDAHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTAP
IQELLLTPNVPATREAVHAISEADLIIIGPGSFYTSLMPILLLNEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL
AIMEQYVGKKVIDAVVVGPKADVSAVNNRIVIQEVLEASDIPYRHDRQLLHNALEKALQALG

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=302, Percent_Identity=97.3509933774834, Blast_Score=560, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 32616; Mature: 32616

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCEEH
GDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRN
HHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LLKVDAHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTAPIQELLLTPNVPATREAVHAI
HHHHHHHEEECCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH
SEADLIIIGPGSFYTSLMPILLLNEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCHHHHH
AIMEQYVGKKVIDAVVVGPKADVSAVNNRIVIQEVLEASDIPYRHDRQLLHNALEKALQA
HHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LG
CC
>Mature Secondary Structure
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAW
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEECCCCEEH
GDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRN
HHHHHHHHHHHCCCHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
LLKVDAHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTAPIQELLLTPNVPATREAVHAI
HHHHHHHEEECCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHH
SEADLIIIGPGSFYTSLMPILLLNEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKL
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHCCCHHHHH
AIMEQYVGKKVIDAVVVGPKADVSAVNNRIVIQEVLEASDIPYRHDRQLLHNALEKALQA
HHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]