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The map label for this gene is ycbW

Identifier: 170683889

GI number: 170683889

Start: 2180954

End: 2181496

Strand: Reverse

Name: ycbW

Synonym: EcSMS35_2172

Alternate gene names: 170683889

Gene position: 2181496-2180954 (Counterclockwise)

Preceding gene: 170682541

Following gene: 170683350

Centisome position: 43.04

GC content: 48.99

Gene sequence:

>543_bases
ATGCGAATTAAACCAGACGATAACTGGCGTTGGTATTACGATGAAGAGCACGATCGAATGATGCTCGATTTAGCCAATGG
TATGCTATTTCGCTCACGTTTTGCGCGCAAAATGTTGACTCCAGATGCCTTTTCTCCCGCAGGCTTTTGCGTTGACGACG
CCGCGCTCTATTTCTCATTTGAAGAAAAATGCCGCGATTTTAATTTATCTAAAGAACAAAAAGCCGAACTGGTGCTTAAT
GCGCTGGTAGCAATTCGTTATCTCAAACCGCAAATGCCGAAAAGCTGGCATTTTGTTTCCCATGGTGAAATGTGGGTGCC
CATGCCGGGCGATGCGGCCTGCGTTTGGTTGAGCGACACTCACGAGCAAGTCAATTTGCTGGTCGTTGAATCTGGCGAAA
ATGCCGCACTATGCCTGCTGGCACAACCCTGCGTTGTTATAGCGGGTCGCGCGATGCAGCTGGGCGACGCCATCAAAATC
ATGAACGACAGGCTGAAACCGCAGGTTAATGTTGACAGCTTCAGCCTCGAACAGGCAGTTTAA

Upstream 100 bases:

>100_bases
TGTTGCTTATTTAGACATTTTGTACTTTTATTGTTGAGGTTATTAAGCGAAGCGACAATGGATTGTGTTGCTGCGGTTTT
ATAGGGTAGGGGAGAGGCAA

Downstream 100 bases:

>100_bases
CGCGTCAGCTTAAGTGCAGTCTTCGGTACACAACTACAGCAAAGAATAGTGCCATCATCACCCATTGCTGATTTTTTCAG
CGGCGTGACTTCGCCTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV

Sequences:

>Translated_180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV
>Mature_180_residues
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLN
ALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
MNDRLKPQVNVDSFSLEQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081807, Length=180, Percent_Identity=100, Blast_Score=375, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCBW_ECOLI (P75862)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   A64835
- RefSeq:   AP_001576.1
- RefSeq:   NP_415466.4
- ProteinModelPortal:   P75862
- DIP:   DIP-11485N
- MINT:   MINT-1227819
- STRING:   P75862
- EnsemblBacteria:   EBESCT00000002634
- EnsemblBacteria:   EBESCT00000014712
- GeneID:   945552
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5125
- KEGG:   eco:b0946
- EchoBASE:   EB3479
- EcoGene:   EG13715
- eggNOG:   NOG05566
- GeneTree:   EBGT00050000010391
- HOGENOM:   HBG416379
- OMA:   KVMHDRL
- ProtClustDB:   CLSK874393
- BioCyc:   EcoCyc:G6486-MONOMER
- Genevestigator:   P75862
- InterPro:   IPR009809

Pfam domain/function: PF07126 DUF1379

EC number: NA

Molecular weight: Translated: 20589; Mature: 20589

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF
CCCCCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEEH
EEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDT
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCEEEEEEECC
HEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV
CCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHCHHHHHHHHCCCCEECCCCCCHHHCC
>Mature Secondary Structure
MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF
CCCCCCCCEEEEEECCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCEEECCEEEEEH
EEKCRDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVWLSDT
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCEEEEEEECC
HEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLEQAV
CCEEEEEEEECCCCEEEEEEECCCEEEECCCHHHCHHHHHHHHCCCCEECCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503