Click here to switch to the map view.

The map label for this gene is yiiQ [H]

Identifier: 170683452

GI number: 170683452

Start: 4449043

End: 4449642

Strand: Reverse

Name: yiiQ [H]

Synonym: EcSMS35_4360

Alternate gene names: 170683452

Gene position: 4449642-4449043 (Counterclockwise)

Preceding gene: 170683111

Following gene: 170680397

Centisome position: 87.79

GC content: 49.17

Gene sequence:

>600_bases
ATGAAGCCAGGGTGTACGCTGTTTTTTCTCTTATATTCTGCATTAACCGTTACAACAACGGCGCATGCACAAACACCAGA
TACGGCAACGACCGCGCCTTATCTGCTGGCTGGAGCCCCTACTTTCGATCTCTCCATCAGCCAGTTTCGAGAAGACTTTA
ACAGCCAGAATCCCAGCCTGCCACTGAACGAATTTCGTGCCATCGACAGCAGTCCCGACAAAGCCAATCTCACTCGTGCT
GCCAGTAAAATTAACGAGAACTTGTATGCTTCTACAGCGCTGGAGCGCGGTACCTTAAAAATCAAAAGCATTCAAATGAC
CTGGCTACCCATCCAGGGGCCAGAGCAAAAAGCCGCGAAAGCGAAAGCTCAGGAATACATGGCAGCGGTGATCCGCACAC
TCACCCCATTAATGACCAAAACACAAAGCCAGAAAAAACTGCAGTCGCTACTAACGGCGGGGAAAAACAAACGTTATTAC
ACCGAGACAGAAGGTGCACTGCGTTATGTTGTCGCGGACAACGGCGAAAAGGGGCTGACCTTCGCTGTTGAACCGATTAA
GCTGGCACTATCTGAATCGCTTGAAGGTTTGAATAAATGA

Upstream 100 bases:

>100_bases
GTAAGTTCCTTGATGGTTGTCTTTTCCAGGATTCTACCCTTTTGACAAGGGCGACAGATATCGTTTTAATCGGAGCCAGT
CATAACAAAAGGTACTGTCA

Downstream 100 bases:

>100_bases
CAAAAAGCAAAGCCTTTGTGCCGATGAATCTCTATACTGTTTCACAGACCTGCTGCCCTGCGGGGCGGCCATCTTCCTTT
ATTCGCTTATAAGCGTGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKPGCTLFFLLYSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRA
ASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK

Sequences:

>Translated_199_residues
MKPGCTLFFLLYSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRA
ASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK
>Mature_199_residues
MKPGCTLFFLLYSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRA
ASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790354, Length=199, Percent_Identity=98.9949748743718, Blast_Score=399, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009918 [H]

Pfam domain/function: PF07305 DUF1454 [H]

EC number: NA

Molecular weight: Translated: 21795; Mature: 21795

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPGCTLFFLLYSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCC
PLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAK
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHH
AKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCE
FAVEPIKLALSESLEGLNK
EEEHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPGCTLFFLLYSALTVTTTAHAQTPDTATTAPYLLAGAPTFDLSISQFREDFNSQNPSL
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCC
PLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIKSIQMTWLPIQGPEQKAAK
CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHH
AKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYYTETEGALRYVVADNGEKGLT
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCE
FAVEPIKLALSESLEGLNK
EEEHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]