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The map label for this gene is yfcR [H]

Identifier: 170683183

GI number: 170683183

Start: 2539882

End: 2540373

Strand: Reverse

Name: yfcR [H]

Synonym: EcSMS35_2494

Alternate gene names: 170683183

Gene position: 2540373-2539882 (Counterclockwise)

Preceding gene: 170680090

Following gene: 170683842

Centisome position: 50.12

GC content: 54.47

Gene sequence:

>492_bases
ATGAAAGGATCGTGGGCGTGGTTGCTGGTGGGCTGCATCGGTAGTTGCTCCGTGACGGCAGGGAGCAAATCGGTGGATAT
GATTTTACGGGTGCTTGTTGATGCTCCGCCTCCTTGTACGGTAACGGGCGCGGAGGTGGAGTTCGGTAATGTTGTCATTA
CCAGAATTGGTGGCGTGAATTATAAGCGCCCCATTGATTACAAGCTTGTCTGTAACAACCTGGCCATGGATGACCTGCGT
CTACAGATGCAGGCGGCAACGGTCGTGATTAACGGTGAAACGGTGATCAGCACGGGGATTCCTGGGTTTGGTATTCGGAT
TCAGAAGGCCAGCGATAGTTCGATACTCGACTTAACGTCTGGCGCATGGCTGCCGTTTAATTTCTCCTCGGGCGCACCAG
CGCTGGAAGCGGTTCCGGTGAAACAGAGCGGCACGTCGTTAACGGCGGCGGAATTTAGCGCCAGCGCCACCATTGTGGTG
GATTACCAATGA

Upstream 100 bases:

>100_bases
GACTACGGCGCGCGCCTGCCGCTGATCTTCCGCTGTGAAGGGGACACCTGCAAGGTGGATGAAGATCAAAGCAGCAAAGG
CTGATAACGGGAGAGCCAGG

Downstream 100 bases:

>100_bases
AACGGATCTCACTTCTTATGCTGTGGGGCTTTTGCTCCATGGCGCTCTCAAATGTCACTTTTCACGGTTATTTAGTGCAG
CCGCCTAACTGCACCATTAG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKGSWAWLLVGCIGSCSVTAGSKSVDMILRVLVDAPPPCTVTGAEVEFGNVVITRIGGVNYKRPIDYKLVCNNLAMDDLR
LQMQAATVVINGETVISTGIPGFGIRIQKASDSSILDLTSGAWLPFNFSSGAPALEAVPVKQSGTSLTAAEFSASATIVV
DYQ

Sequences:

>Translated_163_residues
MKGSWAWLLVGCIGSCSVTAGSKSVDMILRVLVDAPPPCTVTGAEVEFGNVVITRIGGVNYKRPIDYKLVCNNLAMDDLR
LQMQAATVVINGETVISTGIPGFGIRIQKASDSSILDLTSGAWLPFNFSSGAPALEAVPVKQSGTSLTAAEFSASATIVV
DYQ
>Mature_163_residues
MKGSWAWLLVGCIGSCSVTAGSKSVDMILRVLVDAPPPCTVTGAEVEFGNVVITRIGGVNYKRPIDYKLVCNNLAMDDLR
LQMQAATVVINGETVISTGIPGFGIRIQKASDSSILDLTSGAWLPFNFSSGAPALEAVPVKQSGTSLTAAEFSASATIVV
DYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=158, Percent_Identity=52.5316455696203, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI1788675, Length=169, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17070; Mature: 17070

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSWAWLLVGCIGSCSVTAGSKSVDMILRVLVDAPPPCTVTGAEVEFGNVVITRIGGVN
CCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHCCCCCCEEECCEEEECCEEEEEECCCC
YKRPIDYKLVCNNLAMDDLRLQMQAATVVINGETVISTGIPGFGIRIQKASDSSILDLTS
CCCCCCEEEEECCCCCCHHEEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCEEEECC
GAWLPFNFSSGAPALEAVPVKQSGTSLTAAEFSASATIVVDYQ
CCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEEC
>Mature Secondary Structure
MKGSWAWLLVGCIGSCSVTAGSKSVDMILRVLVDAPPPCTVTGAEVEFGNVVITRIGGVN
CCCCEEEEEEEECCCCEEECCCCHHHHHHHHHHCCCCCCEEECCEEEECCEEEEEECCCC
YKRPIDYKLVCNNLAMDDLRLQMQAATVVINGETVISTGIPGFGIRIQKASDSSILDLTS
CCCCCCEEEEECCCCCCHHEEEEEEEEEEECCCEEEECCCCCCCEEEEECCCCCEEEECC
GAWLPFNFSSGAPALEAVPVKQSGTSLTAAEFSASATIVVDYQ
CCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]