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The map label for this gene is fliO [H]

Identifier: 170682928

GI number: 170682928

Start: 1237501

End: 1237866

Strand: Reverse

Name: fliO [H]

Synonym: EcSMS35_1237

Alternate gene names: 170682928

Gene position: 1237866-1237501 (Counterclockwise)

Preceding gene: 170683738

Following gene: 170682430

Centisome position: 24.42

GC content: 55.46

Gene sequence:

>366_bases
ATGAATAACCACGCTACTGTGCAATCTTCCGCGCCGGTTTCTGCTGCGCCACTGCTGCAGGTGAGCGGCGCACTCATCGC
CATTATTGCCCTGATCCTCGCTGCTGCCTGGCTGGTAAAACGGTTGGGATTTGCCCCTAAACGCACTGGCGTTAACGGTC
TGAAAATTAGCGCCAGTGCTTCGCTGGGCGCGCGTGAACGGGTTGTGGTGGTCGATGTGGATGATGCACGGCTGGTGCTC
GGCGTTACCGCAGGGCAAATCAATCTGCTGCATAAACTTCCCCCTTCTGCACCAACGGAAGAGATACCGCAGACCGATTT
TCAGTCGGTCATGAAAAATTTGCTTAAGCGTAGCGGGAGATCCTGA

Upstream 100 bases:

>100_bases
TCGCCCAGGGCGAAGTTGTCGTAGTCGCTGATAAATATGGCGTGCGGATCACCGATATTATTACCCCGTCTGAGCGAATG
CGTCGCCTGAGCCGTTAGTG

Downstream 100 bases:

>100_bases
TGCGTCGTTTATTGTCTGTCGCACCTGTCCTTCTCTGGCTGATTACGCCCCTCGCCTTCGCGCAACTACCGGGTATCACC
AGCCAGCCGCTGCCTGGCGG

Product: flagellar biosynthesis protein FliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVDDARLVL
GVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS

Sequences:

>Translated_121_residues
MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVDDARLVL
GVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS
>Mature_121_residues
MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASASLGARERVVVVDVDDARLVL
GVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGRS

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliO/mopB family [H]

Homologues:

Organism=Escherichia coli, GI87082005, Length=121, Percent_Identity=99.1735537190083, Blast_Score=237, Evalue=1e-64,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781 [H]

Pfam domain/function: PF04347 FliO [H]

EC number: NA

Molecular weight: Translated: 12656; Mature: 12656

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
SLGARERVVVVDVDDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGR
CCCCCCEEEEEECCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
S
C
>Mature Secondary Structure
MNNHATVQSSAPVSAAPLLQVSGALIAIIALILAAAWLVKRLGFAPKRTGVNGLKISASA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
SLGARERVVVVDVDDARLVLGVTAGQINLLHKLPPSAPTEEIPQTDFQSVMKNLLKRSGR
CCCCCCEEEEEECCCCEEEEEECCCCEEHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8282695; 9097040; 9278503 [H]