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The map label for this gene is kpdB [H]

Identifier: 170682784

GI number: 170682784

Start: 2938490

End: 2939083

Strand: Reverse

Name: kpdB [H]

Synonym: EcSMS35_2864

Alternate gene names: 170682784

Gene position: 2939083-2938490 (Counterclockwise)

Preceding gene: 170684160

Following gene: 170681645

Centisome position: 57.99

GC content: 58.08

Gene sequence:

>594_bases
ATGAAACTGATCGTCGGGATGACAGGGGCTACCGGTGCGCCTCTTGGGGTGGCATTACTGCAAGCGCTGCGGGAGATGCC
GAATGTCGAGACTCATCTGGTGATGTCGAAGTGGGCGAGAACCACCATTGAACTGGAAACGCCTTACAGCGCTCGCGATG
TTGCTGCCCTCGCAGACTTCAGCCATAACCCGGCGGATCAGGCGGCGACCATCTCCTCAGGTTCCTTTCGTACCGACGGC
ATGATCGTTATTCCGTGCAGTATGAAAACGCTCGCCGGTATCCGTGCCGGTTACGCCGATGGCCTGGTGGGGCGCGCGGC
GGACGTCGTGCTCAAAGAAGGCCGCAAACTGGTGCTGGTGCCGCGTGAAATGCCGCTTAGCACAATCCATCTCGAAAATA
TGCTCGCACTTTCGCGCATGGGCGTGGCGATGGTGCCGCCGATGCCTGCCTTTTATAACCATCCCGAAACGGTAGATGAC
ATTGTCCACCACGTGGTAGCCCGCGTGCTGGATCAATTTGGCCTCGAACATCCTCACGCCAGGCGCTGGCAAGGATTGCC
GCAGGCCCGGAATTTTTCTCAGGAGAATGAATAA

Upstream 100 bases:

>100_bases
TGACGAAGAAGATGTTGTTACTTTTCAGCGCTTGCCGCGATGAAAACAGAGGCGTATTTTAATAATAACGTTCGTATACG
AACAATTTAGAGAGTAAGCA

Downstream 100 bases:

>100_bases
TGGCATTTGATGATTTACGCAGCTTTTTACAGGCGCTCGACGACCATGGGCAATTGCTGAAAATCAGCGAAGAGGTGAAC
GCAGAACCGGATCTGGCAGC

Product: 4-hydroxybenzoate decarboxylase, subunit B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWARTTIELETPYSARDVAALADFSHNPADQAATISSGSFRTDG
MIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE

Sequences:

>Translated_197_residues
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWARTTIELETPYSARDVAALADFSHNPADQAATISSGSFRTDG
MIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE
>Mature_197_residues
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWARTTIELETPYSARDVAALADFSHNPADQAATISSGSFRTDG
MIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDD
IVHHVVARVLDQFGLEHPHARRWQGLPQARNFSQENE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=54.8387096774194, Blast_Score=207, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6320746, Length=185, Percent_Identity=54.0540540540541, Blast_Score=211, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21472; Mature: 21472

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWARTTIELETPYSARDVAALADF
CEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHC
SHNPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV
CCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHCHHCCHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA
CCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
RRWQGLPQARNFSQENE
HHHCCCCHHHCCCCCCC
>Mature Secondary Structure
MKLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWARTTIELETPYSARDVAALADF
CEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHC
SHNPADQAATISSGSFRTDGMIVIPCSMKTLAGIRAGYADGLVGRAADVVLKEGRKLVLV
CCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHHCHHCCHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAMVPPMPAFYNHPETVDDIVHHVVARVLDQFGLEHPHA
CCCCCCHHHHHHHHHHHHHCCEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
RRWQGLPQARNFSQENE
HHHCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]