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The map label for this gene is yqjH [H]

Identifier: 170682681

GI number: 170682681

Start: 3441845

End: 3442609

Strand: Reverse

Name: yqjH [H]

Synonym: EcSMS35_3364

Alternate gene names: 170682681

Gene position: 3442609-3441845 (Counterclockwise)

Preceding gene: 170682786

Following gene: 170682273

Centisome position: 67.92

GC content: 56.99

Gene sequence:

>765_bases
ATGAATAACTCCCCCCGCTACCCGCAGCGCGTTCGCAATGATCTGCGCTTCCGTGAACTGACTGTGTTACGCGTTGAGCG
CATCAGCGCCGGTTTTCAGCGCATTGTCCTCGGCGGCGAGGCGCTGGACGGTTTTACGTCGCGCGGCTTTGACGATCACA
GCAAACTCTTCTTTCCTCAACCTGACGCTCACTTTGTGCCGCCAACGGTAACGGAAGAGGGCATCGTCTGGCCGGAAGGA
CCACGCCCACCGTCGCGTGACTATACGCCGCTGTATGACGAACTACGCCATGAACTGGCGATCGATTTCTTTATTCACGA
CGGTGGGGTCGCCAGCGGCTGGGCGATGCAGGCGAAACCGGGCGATAAACTTACGGTGGCAGGTCCGCGCGGTTCGCTGG
TGGTGCCGGAAGATTACGCGTATCAGCTGTATGTCTGCGATGAATCCGGAATGCCCGCACTGCGCCGCCGCCTGGAAACG
TTGAGCAAACTTGCCGTTAAACCGCAAGTTAGTGCGCTGGTTAGCGTGCGGGATAACGCCTGTCAGGATTATCTCGCGCA
CCTTGATGGTTTTAATATCGAATGGCTGGCACATGATGAGCAGGCGGTAGATGCGCGTCTGGCGCAGATGCAAATCCCTG
CCGATGATTACTTCATCTGGATAACCGGCGAAGGCAAAGTCGTTAAGAATTTAAGCCGCCGCTTTGAAGCGGAACAGTAT
GACCCACAGCGGGTACGTGCAGCGGCTTACTGGCACGCAAAGTAA

Upstream 100 bases:

>100_bases
ATCAGTTCTACAAATCGCTTGCATTTATCATGATTAACAATCATTATCATTTACGAAAATTATTTAGATATATCTGATTA
CTATCACGAAGGCGATAACA

Downstream 100 bases:

>100_bases
CTGATATATATAAAGAAAAAGGCTGACGATTTCTCGTCAGCCTTTGCTATGTCTGGTGGCCCCTGCTGGACTTGAACCAG
CGACCAAGCGATTATGAGTC

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEG
PRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAKPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
DPQRVRAAAYWHAK

Sequences:

>Translated_254_residues
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEG
PRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAKPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
DPQRVRAAAYWHAK
>Mature_254_residues
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEG
PRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAKPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
DPQRVRAAAYWHAK

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=254, Percent_Identity=99.2125984251969, Blast_Score=523, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 28858; Mature: 28858

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQ
CCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHEEEECCCHHCCHHHCCCCCCCEEECCC
PDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAKP
CCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCEEEECCC
GDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNA
CCEEEEECCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
CQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
HHHHHHHHCCCCEEEEECCHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHCCCCC
DPQRVRAAAYWHAK
CHHHHHEEEEECCC
>Mature Secondary Structure
MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDGFTSRGFDDHSKLFFPQ
CCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCHHEEEECCCHHCCHHHCCCCCCCEEECCC
PDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAIDFFIHDGGVASGWAMQAKP
CCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHEEEEEEECCCCCCCEEEECCC
GDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLETLSKLAVKPQVSALVSVRDNA
CCEEEEECCCCCEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
CQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYFIWITGEGKVVKNLSRRFEAEQY
HHHHHHHHCCCCEEEEECCHHHHHHHHHHEECCCCCEEEEEECCCHHHHHHHHHHCCCCC
DPQRVRAAAYWHAK
CHHHHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]