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The map label for this gene is yhdN [H]

Identifier: 170682418

GI number: 170682418

Start: 3666376

End: 3666744

Strand: Reverse

Name: yhdN [H]

Synonym: EcSMS35_3588

Alternate gene names: 170682418

Gene position: 3666744-3666376 (Counterclockwise)

Preceding gene: 170682965

Following gene: 170680832

Centisome position: 72.35

GC content: 46.61

Gene sequence:

>369_bases
ATGTGGTTACTTGACCAGTGGGCAGAGCGTCATATTACTGAGGCACAATCCAAAGGTGAGTTTGATAATCTTCCGGGAAG
TGGCGAGCCATTGATTCTGGATGATGATTCACACGTGCCACCGGAATTACGTGCGGGGTATCGCTTGCTGAAGAATGCCG
GTTGCTTACCGCCAGAACTTGAGCAGCGTAGGGAAGCAATACAGCTTCTGGATATCCTCAAAGGTATCCGTCATGATGAT
CCGCAATATAAAGAGGTTAGTCGTCGATTGTCATTACTGGAATTGAAGCTGCGACAAGCTGGATTGAGTACCGATTTTTT
ACGCGGCGATTATGCTGACAAGTTGTTGGACAAAATCTACGATAACTAG

Upstream 100 bases:

>100_bases
GCAACGTAAAAAAACCCGCCCCGGCGGGTTTTTTTATACCCGTAGTATCCCCACTTATCTACAATAGCTGTACTCTTTTT
GTTCATCCCCTGGAGTATTT

Downstream 100 bases:

>100_bases
TGGAGTATGTATGTATCGCATTGGTGAGCTGGCAAAAATGGCGGAAGTAACACCCGACACGATTCGTTACTACGAAAAGC
AGCAGATGATGGAGCATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYKEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIYDN

Sequences:

>Translated_122_residues
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYKEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIYDN
>Mature_122_residues
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPELEQRREAIQLLDILKGIRHDD
PQYKEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIYDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789688, Length=122, Percent_Identity=95.9016393442623, Blast_Score=236, Evalue=4e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018961 [H]

Pfam domain/function: PF09350 DUF1992 [H]

EC number: NA

Molecular weight: Translated: 14066; Mature: 14066

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIQLLDILKGIRHDDPQYKEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DN
CC
>Mature Secondary Structure
MWLLDQWAERHITEAQSKGEFDNLPGSGEPLILDDDSHVPPELRAGYRLLKNAGCLPPEL
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHH
EQRREAIQLLDILKGIRHDDPQYKEVSRRLSLLELKLRQAGLSTDFLRGDYADKLLDKIY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063098; 9278503 [H]