| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is yhgE [H]
Identifier: 170682230
GI number: 170682230
Start: 3737577
End: 3739301
Strand: Reverse
Name: yhgE [H]
Synonym: EcSMS35_3680
Alternate gene names: 170682230
Gene position: 3739301-3737577 (Counterclockwise)
Preceding gene: 170684065
Following gene: 170680526
Centisome position: 73.78
GC content: 50.03
Gene sequence:
>1725_bases ATGGATAGCGTTGAACTTTCACCCGCAACACGTTGGGGGATGATTGCTACCGGATTACTTCAGGGTCTGGTTTGCTACCT GCTGATCGCCTGGCTTGCAGGAAAAAATCTCAGTTGGATTGTTTATGGCGTGCCTGCGACCGTCGCGTTTTCATCCGTTT TACTCTTCTCCGTGATCTCCTTTAAACAGAAGCGCCTTTGGGGATGGCTGGCGCTGGTGTTTATTGCCACGCTAGGGATG AGCGGTTGGCTAAAGTGGCAAATTGATGGCATGACCCCCTGGAGAGCTGAAAAGGCGATTTGGGATTTTGGCTGCTATCT GCTGCTGATGGCAATGTTGTTGCTACCGTGGATACAACAAAGCCTTCGCATCCGCAATGACAGTAGCCGCTATCGCTATT TTTACCAGTCAGTATGGCATAACGTACTTATATTACTGGTGATTTTTCTCGCCAATGGCCTGACGTGGCTGGTGCTTTTA CTGTGGAGTGAGTTGTTTAAACTTGTTGGCATCACGTTTTTCAAAACGCTCTTTTTTGCAACCGACTGGTTTATTTATCT AACGTTAGGTCTGGTTACCGCGCTGGCGGTGATCCTCGCGCGAACACAGTCACGTTTAATCGACTCTATTCAAAAGTTGT TCACGTTAATCGCCACGGGGTTGCTGCCGTTAGTATCATTGCTAACCCTGATGTTTATTATCACCCTGCCGTTTACGGGC CTGAGCGCGATTTCTCGCCACATCTCCGCCGCTGGGTTGCTGTTAACGCTGGCCTTTTTGCAATTGATCTTAATGGCTAT TGTCCGCGATCCGCAAAAAGCGTCACTTCCCTGGACGGGGCCGTTGCGTTGCCTGATTAAAACCGCTCTGCTGGCTGCTC CGCTGTATGTGTTCGTCGCCGCCTGGGCGTTATGGCTGCGGGTCGCTCAGTACGGCTGGACTGTCGACCGCTTGCAGGGC GCGCTGGCGGTGCTGGTGTTACTGGTATGGTCGCTGGGGTATTTTGTCAGTATCGTCTGGCGTAAAGAGCAAAACCCTCT TGTTCTTCAGGGCAAAGTGAACCTTGCGGTTTCGTTATTGGTGTTGGTAATACTGGTGCTTCTTAATTCGCCGGTGCTGG ATAGTATGCGCATTAGTGTGAACAGTCATATGGCGCGTTATCAGAGCGGCAAAAACACGCCAGACCAGGTAACTATCTAC ATGCTCGAACAGAGCGGTCGCTATGGACGTGCGGCGCTTGAGTCGCTGAAAAGCGATGCCGGGTTTATGAAAGACCCGAA ACGCGCGCGGGATCTGCTGATGGCGTTAGATGGAGAGCAACATCTTCAGGAACAGGTATCGGAAAAAGTATTAGCCGATA ATGTGTTAATTGCCCCAGGTTCTGGTAAACCGGATGCGACATTCTGGTCGGCCTTAATCCAGGATCGCTTTAACGTGATG ACCTGTATTGAAAAAGACGCCTGCGTACTGGTCGAGCAAGATCTGAATAGTGATGGTCAGGCGGAGCGGATCCTGTTTGC TTTTAATGATGACAGAGTCATTGTCTATGGCTTTGACTCAGATAGAAAAGAATGGGACGCGCTTGATATGAGTTTACTTC CGCGCCAAATAACGAAAGAAAAATTACTCGCTGCTGCGAAGGATGGAAAGCTGGGGACGAGGCCTAAAGCGTGGCGCGAT CTGACGGTAGATGGTGAAACGCTGGAAATAAACTTAAGTAAGTGA
Upstream 100 bases:
>100_bases GATTCACCACGCTAACTTTTTTTGATTATTTTCTGAAAAAAGCAAAATACTACGGCCTGGATGCGATAATTAACCCACTT TTTGATTCTGGATAACTAAC
Downstream 100 bases:
>100_bases CAACGCTTTTAACGGATACGACGCTGTATCTGACCAAAATAACTTGCGATTTATTTCATAGGCCTGGTAAGCGCAGCGCA TCAGGCCATTACGTCGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MDSVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNLSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQIDGMTPWRAEKAIWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL LWSELFKLVGITFFKTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLAAPLYVFVAAWALWLRVAQYGWTVDRLQG ALAVLVLLVWSLGYFVSIVWRKEQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRFNVM TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPRQITKEKLLAAAKDGKLGTRPKAWRD LTVDGETLEINLSK
Sequences:
>Translated_574_residues MDSVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNLSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQIDGMTPWRAEKAIWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL LWSELFKLVGITFFKTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLAAPLYVFVAAWALWLRVAQYGWTVDRLQG ALAVLVLLVWSLGYFVSIVWRKEQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRFNVM TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPRQITKEKLLAAAKDGKLGTRPKAWRD LTVDGETLEINLSK >Mature_574_residues MDSVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNLSWIVYGVPATVAFSSVLLFSVISFKQKRLWGWLALVFIATLGM SGWLKWQIDGMTPWRAEKAIWDFGCYLLLMAMLLLPWIQQSLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLL LWSELFKLVGITFFKTLFFATDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLAAPLYVFVAAWALWLRVAQYGWTVDRLQG ALAVLVLLVWSLGYFVSIVWRKEQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIY MLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRFNVM TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPRQITKEKLLAAAKDGKLGTRPKAWRD LTVDGETLEINLSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yrdB [H]
Homologues:
Organism=Escherichia coli, GI1789805, Length=574, Percent_Identity=95.6445993031359, Blast_Score=1001, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64554; Mature: 64554
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNLSWIVYGVPATVAFSSVLLFSVIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH FKQKRLWGWLALVFIATLGMSGWLKWQIDGMTPWRAEKAIWDFGCYLLLMAMLLLPWIQQ HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFKTLFFA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLAAPLYVFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGYFVSIVWRKEQNPLVLQGKVNLAVSLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHHH VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC GFMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRFNVM CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPRQITKE HHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH KLLAAAKDGKLGTRPKAWRDLTVDGETLEINLSK HHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECC >Mature Secondary Structure MDSVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNLSWIVYGVPATVAFSSVLLFSVIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH FKQKRLWGWLALVFIATLGMSGWLKWQIDGMTPWRAEKAIWDFGCYLLLMAMLLLPWIQQ HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLRIRNDSSRYRYFYQSVWHNVLILLVIFLANGLTWLVLLLWSELFKLVGITFFKTLFFA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TDWFIYLTLGLVTALAVILARTQSRLIDSIQKLFTLIATGLLPLVSLLTLMFIITLPFTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASLPWTGPLRCLIKTALLAAPLYVFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGYFVSIVWRKEQNPLVLQGKVNLAVSLL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECHHHHHHHHH VLVILVLLNSPVLDSMRISVNSHMARYQSGKNTPDQVTIYMLEQSGRYGRAALESLKSDA HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCC GFMKDPKRARDLLMALDGEQHLQEQVSEKVLADNVLIAPGSGKPDATFWSALIQDRFNVM CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHH TCIEKDACVLVEQDLNSDGQAERILFAFNDDRVIVYGFDSDRKEWDALDMSLLPRQITKE HHHCCCCEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH KLLAAAKDGKLGTRPKAWRDLTVDGETLEINLSK HHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]