Click here to switch to the map view.

The map label for this gene is yhcH [H]

Identifier: 170682177

GI number: 170682177

Start: 3595939

End: 3596403

Strand: Reverse

Name: yhcH [H]

Synonym: EcSMS35_3516

Alternate gene names: 170682177

Gene position: 3596403-3595939 (Counterclockwise)

Preceding gene: 170683075

Following gene: 170681084

Centisome position: 70.96

GC content: 46.45

Gene sequence:

>465_bases
ATGATGATGGGTGAAGTACAGTCATTACCGTCTGCCGGATTACATCCTGCGTTACAGGACGCGTTAACGCTGGCATTAGC
TGCCAGACCGCAAGAAAAAGCGCCGGGTCGTTACGAATTACAGGGCGACAATATTTTTATGAATGTCATGACGTTTAACA
CTCAATCGCCCGTTGAGAAAAAAGCCGAATTGCACGAACAATACATTGATATCCAGCTGTTATTAAACGGTGAGGAACGG
ATCCTGTTTGGCATGGCAGGCACTGCGCGTCAGTGTGAAGAGTTCCACCATGAAGATGATTACCAGCTTTGCAGCGCCAT
TGAGAATGAGCAAACCATCATCTTAAAACCGGGAATGTTTGCCGTGTTTATGCCGGGAGAACCGCATAAACCAGGATGCG
TTGTCGGCGAACCTGATGAGATTAAAAAGGTTGTGGTGAAGGTTAAGGCTGATTTAATGGCTTAA

Upstream 100 bases:

>100_bases
CGCAGGAGCCAGCGGCATTTCATGTTGATTTACTGGCGGCGCACTACCGTCATGATGCAGGTTTACTTGGGGCTGCGCTG
TTGGCCCAGGGAGAAAAATT

Downstream 100 bases:

>100_bases
ACGTATTCGCTCAGGCAGGGGGCGCTGGTTGGGAACTCAACGTTGGCATGGTTTCGCTGCTCTTGTGTAGATGTGTTGCA
GTTATTTGCGACATTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSAIENEQTIILKPGMFAVFMPGEPHKPGCVVGEPDEIKKVVVKVKADLMA

Sequences:

>Translated_154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSAIENEQTIILKPGMFAVFMPGEPHKPGCVVGEPDEIKKVVVKVKADLMA
>Mature_154_residues
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEER
ILFGMAGTARQCEEFHHEDDYQLCSAIENEQTIILKPGMFAVFMPGEPHKPGCVVGEPDEIKKVVVKVKADLMA

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0227 [H]

Homologues:

Organism=Escherichia coli, GI1789615, Length=154, Percent_Identity=97.4025974025974, Blast_Score=293, Evalue=2e-81,
Organism=Escherichia coli, GI1790001, Length=149, Percent_Identity=32.2147651006711, Blast_Score=88, Evalue=3e-19,
Organism=Escherichia coli, GI87082398, Length=148, Percent_Identity=31.0810810810811, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 17110; Mature: 17110

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEECCCCCHHH
KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSAIENEQTIILKPGMF
HHHHHHHHEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHHHCCCCCEEEECCCEE
AVFMPGEPHKPGCVVGEPDEIKKVVVKVKADLMA
EEECCCCCCCCCCEECCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDNIFMNVMTFNTQSPVEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEEEECCCCCHHH
KAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQLCSAIENEQTIILKPGMF
HHHHHHHHEEEEEEECCCCEEEEEECCCHHHHHHHCCCCCHHHHHHCCCCCEEEECCCEE
AVFMPGEPHKPGCVVGEPDEIKKVVVKVKADLMA
EEECCCCCCCCCCEECCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]