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The map label for this gene is fliK [H]

Identifier: 170682141

GI number: 170682141

Start: 1239857

End: 1240984

Strand: Reverse

Name: fliK [H]

Synonym: EcSMS35_1241

Alternate gene names: 170682141

Gene position: 1240984-1239857 (Counterclockwise)

Preceding gene: 170680856

Following gene: 170682191

Centisome position: 24.48

GC content: 54.79

Gene sequence:

>1128_bases
ATGATTCGCTTAGCGCCCTTAATTACCGCCGACGTTGACACCACCACATTGCCTGGCGGCAAAGCCAGCGATGCTGCACA
AGATTTTCTCGCGTTGTTGAGCGAAGCATTAGCAGGCGAGACAACTACCGACAAAGCGGCCCCCCAGTTGCTGGTGGCAA
CAGATAAGCCCACGACAAAAGGCGAGCCGCTGGTCAGCGAGATTCTTGCCGATGCGCAACAAGCGGATTTACTGATCCCT
GTGGATGAAACACCGCCTGTCATCAACGACGAACAATCCACATCAACACCATTAACCACCGCTCAAACGATGACGTTGGC
TGCGGTGGCTGGCAACAATACGGCAAAAGACGAAAAAGCGGATGATCTGAATGAAGACGTCACCGCAAGCCTGAGCGCCC
TTTTTGCGATGTTGCCGGGTTTTGACAATACGCCCAAAGTGACTGATGCGCCGTCAACCGTGTTACCGACAGAGAAACCA
ACGCTCTTCACAAAACTGACTTCTGAGCAACTCACAACAGCACAGCCTGATGACGCCCCCGGCACACCAGCTCAGCCATT
AACACCGCTGGTAGCAGAAGCCCAGAGTAAAGCGGAAGTCATCAGCACACCTTCACCGGTGACCGCTGCCGCCAGCCCGC
TAATCACTCCACACCAGACACAGCCACTGCCCACCGTCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGG
CAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGACTGCACCCACAGGA
TTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCTCAAATCCAGATGGTTTCACCGCATCAGCATGTAC
GCGCCGCCCTGGAAGCAGCGCTGCCGGTACTGCGTACGCAGCTGGCCGAAAGTGGCATTCAGTTAGGGCAAAGCAACATC
AGTGGCGAAAGCTTTAGTGGTCAGCAGCAGGCCGCTTCCCAACAACAGCAAAGCCAACGCACAGTAAACCATGAACCTCT
GGCGGGGGAAGACGACGATACGCTTCCGGTTCCCGTCTCTTTACAAGGGCGCGTAACAGGCAACAGCGGCGTTGATATTT
TCGCCTAA

Upstream 100 bases:

>100_bases
TGCAGGAACGGCAATCCACGGCGGCACTGCTTGCAGAAAACCGCCTCGATCAGAAAAAGATGGATGAGTTCGCCCAGCGC
GCCGCCATGAGGAAACCTGA

Downstream 100 bases:

>100_bases
CGTCAGAGGTAGCACCGTAATCCGCGTCTTTTCCCCGCTTTGTTGCGCTCAAGACGCAGGATAATTAGCCGATAAGCAGT
AGCGACACAGGAAGACCGCA

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTKGEPLVSEILADAQQADLLIP
VDETPPVINDEQSTSTPLTTAQTMTLAAVAGNNTAKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPTEKP
TLFTKLTSEQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEW
QQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNI
SGESFSGQQQAASQQQQSQRTVNHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA

Sequences:

>Translated_375_residues
MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTKGEPLVSEILADAQQADLLIP
VDETPPVINDEQSTSTPLTTAQTMTLAAVAGNNTAKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPTEKP
TLFTKLTSEQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEW
QQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNI
SGESFSGQQQAASQQQQSQRTVNHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA
>Mature_375_residues
MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTKGEPLVSEILADAQQADLLIP
VDETPPVINDEQSTSTPLTTAQTMTLAAVAGNNTAKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPTEKP
TLFTKLTSEQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEW
QQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNI
SGESFSGQQQAASQQQQSQRTVNHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA

Specific function: Controls the length of the flagellar hook [H]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliK family [H]

Homologues:

Organism=Escherichia coli, GI1788253, Length=375, Percent_Identity=97.3333333333333, Blast_Score=691, Evalue=0.0,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001635
- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 39267; Mature: 39267

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTK
CEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
GEPLVSEILADAQQADLLIPVDETPPVINDEQSTSTPLTTAQTMTLAAVAGNNTAKDEKA
CCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCHH
DDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPTEKPTLFTKLTSEQLTTAQPDDAP
HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCC
GTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEW
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHH
QQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAA
HHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHH
LPVLRTQLAESGIQLGQSNISGESFSGQQQAASQQQQSQRTVNHEPLAGEDDDTLPVPVS
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
LQGRVTGNSGVDIFA
EEEEEECCCCCEECC
>Mature Secondary Structure
MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTDKAAPQLLVATDKPTTK
CEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCC
GEPLVSEILADAQQADLLIPVDETPPVINDEQSTSTPLTTAQTMTLAAVAGNNTAKDEKA
CCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCHH
DDLNEDVTASLSALFAMLPGFDNTPKVTDAPSTVLPTEKPTLFTKLTSEQLTTAQPDDAP
HCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHHCCCCCCCCC
GTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPHQTQPLPTVAAPVLSAPLGSHEW
CCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHH
QQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLKVDDNQAQIQMVSPHQHVRAALEAA
HHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHH
LPVLRTQLAESGIQLGQSNISGESFSGQQQAASQQQQSQRTVNHEPLAGEDDDTLPVPVS
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
LQGRVTGNSGVDIFA
EEEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631687; 9097040; 9278503 [H]