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The map label for this gene is yfcA [H]

Identifier: 170681877

GI number: 170681877

Start: 2531518

End: 2532327

Strand: Reverse

Name: yfcA [H]

Synonym: EcSMS35_2484

Alternate gene names: 170681877

Gene position: 2532327-2531518 (Counterclockwise)

Preceding gene: 170680002

Following gene: 170681036

Centisome position: 49.96

GC content: 53.09

Gene sequence:

>810_bases
ATGGAAACGTTTAATAGCCTGTTTATGGTTTCCCCGCTGTTGCTGGGAGTTCTCTTTTTTGTCGCCATGCTGGCGGGATT
TATCGACTCGATTGCCGGTGGCGGTGGGTTACTCACCATTCCGGCATTGATGGCGGCGGGGATGTCTCCGGCTAACGCGC
TGGCAACTAATAAACTGCAAGCCTGCGGCGGCTCTATTTCCGCCACTATCTACTTTATTCGGCGCAAAGTGGTTAGCTTA
AGCGATCAGAAACTCAATATCGCCATGACCTTTGTCGGCTCAATGAGCGGCGCGCTGTTGGTGCAGTATGTTCAGGCCGA
TGTCTTACGGCAGATTTTACCGATCCTGGTGATTTGTATCGGCCTCTATTTTTTGCTGATGCCAAAACTGGGAGAAGAAG
ATCGCCAGCGCCGGATGTATGGACTGCCATTTGCGCTGGTGGCGGGGGGCTGCGTCGGTTTTTACGATGGATTCTTTGGC
CCGGCTGCTGGGTCGTTTTACGCGCTGGCCTTTGTTACGCTGTGCGGATTCAACCTCGCCAAAGCCACGGCCCACGCCAA
ATTACTCAACGCAACGTCAAACATCGGTGGTTTGCTGCTGTTTATTCTCGGCGGCAAAGTGATTTGGGCGACAGGATTTG
TGATGTTGGTAGGACAGTTCCTCGGCGCGCGCATGGGGTCAAGACTGGTGTTGAGCAAAGGACAAAAGCTGATCCGCCCG
ATGATCGTTATCGTCTCGGCGGTGATGAGTGCCAAATTACTTTACGATAGCCACGGACAGGAGATCCTCCACTGGTTGGG
GATGAACTAA

Upstream 100 bases:

>100_bases
GGTTTGAACCACCAAAACCGGGAACAACAAAGCCTGAGAAGAAGACACCGCCTCCGTTGCCGCCTTCCTGCCAGGCGCTA
CTGGATGAGCACGTGATCTA

Downstream 100 bases:

>100_bases
TGAACAGTACACACCACTATGAGCAGTTGATTGAGATTTTTAATAGCTGCTTTGCCGATGAATTTAATACCCGTCTGATT
AAAGGCGACGACGAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLGMN

Sequences:

>Translated_269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLGMN
>Mature_269_residues
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQACGGSISATIYFIRRKVVSL
SDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFG
PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
MIVIVSAVMSAKLLYDSHGQEILHWLGMN

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=269, Percent_Identity=99.6282527881041, Blast_Score=534, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 28630; Mature: 28630

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALMAAGMSPANALATNKLQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHH
ACGGSISATIYFIRRKVVSLSDQKLNIAMTFVGSMSGALLVQYVQADVLRQILPILVICI
HCCCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
GLYFLLMPKLGEEDRQRRMYGLPFALVAGGCVGFYDGFFGPAAGSFYALAFVTLCGFNLA
HHHHHHHCCCCCHHHHHHHHCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHCCHHH
KATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVGQFLGARMGSRLVLSKGQKLIRP
HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHH
MIVIVSAVMSAKLLYDSHGQEILHWLGMN
HHHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]