| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is 170681767
Identifier: 170681767
GI number: 170681767
Start: 2261611
End: 2262453
Strand: Reverse
Name: 170681767
Synonym: EcSMS35_2239
Alternate gene names: NA
Gene position: 2262453-2261611 (Counterclockwise)
Preceding gene: 170679924
Following gene: 170681503
Centisome position: 44.64
GC content: 48.28
Gene sequence:
>843_bases ATGTCTGCAATCACACTCTCCCATCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCTCAGTCAGCCACAT TCTGGCTGTACGAAAGAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATCTCATCAATGACAGAAA GTATTGGAGGTAAAACCGCCCCGGACTGGGCCATGAAACAGGATTTTCGCTGCGGTTGCTGGCTGATGGAGAAACCCGAA ACAGCAATGAAAGCCATTACCCGGAATCTTGACCGAGAAATCTGGCGTGACCTGATGCAACGTTCAGGGATGCTTTCCTT AATGGATGCACAGGCCCGTGATACATGGTACCGGTCACTGGAGTATGATAATTTTCCGGAAGTCAGTGAAGCGAACATTC TGAGCACATTTGAACAACTGCACCAGAACAAAGATGAAGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGGGGATTGAGC TGGAATTACAAAACTAATTGCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGATGGGACCGGTGGGG ATTTCATCTTATCACCGGGCACCAGGTAGATCGACTTGCCGACCTGGAAAGAATGCTGCACCTGTTCAGCGGCAAACCGA TCCCCGACAACCGGGAAAACATCACCCTTCGTCTGGATGACCACATCCAGTCTGTTCAGGGTAAAGAGGACTATGAAGAT GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCACACATCACGTTCAGGAAACCAGAACTGGTTGACAGACTGAA TGATATTATCGCAAAACACTATCCTGACATGCTGGCAGTATAG
Upstream 100 bases:
>100_bases GCAACAGAACAGGTGAGTCTTACTCACCAGACTTCATTCCACTGACGCCAGCCTGAATACGGCTGGCGTTTTCGTTTATA AACCAAAAGGAATATCAATT
Downstream 100 bases:
>100_bases CTTTGCCAGTATGCTCAAAGATCGGAAATTGTCCGATAAGATATGATCGCGGGGCATATAAACCGGTTTCAGATGGCATA CCCGATGGCATACTGTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSAITLSHPEVVNGHTDVICSTSVSHILAVRKSTLLQIDTLIRQLAEISSMTESIGGKTAPDWAMKQDFRCGCWLMEKPE TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEVSEANILSTFEQLHQNKDEVFERGVINVFRGLS WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGHQVDRLADLERMLHLFSGKPIPDNRENITLRLDDHIQSVQGKEDYED EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV
Sequences:
>Translated_280_residues MSAITLSHPEVVNGHTDVICSTSVSHILAVRKSTLLQIDTLIRQLAEISSMTESIGGKTAPDWAMKQDFRCGCWLMEKPE TAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEVSEANILSTFEQLHQNKDEVFERGVINVFRGLS WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGHQVDRLADLERMLHLFSGKPIPDNRENITLRLDDHIQSVQGKEDYED EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV >Mature_279_residues SAITLSHPEVVNGHTDVICSTSVSHILAVRKSTLLQIDTLIRQLAEISSMTESIGGKTAPDWAMKQDFRCGCWLMEKPET AMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEVSEANILSTFEQLHQNKDEVFERGVINVFRGLSW NYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGHQVDRLADLERMLHLFSGKPIPDNRENITLRLDDHIQSVQGKEDYEDE MFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32477; Mature: 32345
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAITLSHPEVVNGHTDVICSTSVSHILAVRKSTLLQIDTLIRQLAEISSMTESIGGKTA CCCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSL CCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHC EYDNFPEVSEANILSTFEQLHQNKDEVFERGVINVFRGLSWNYKTNCPCKFGSKIIVNNL CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHH VRWDRWGFHLITGHQVDRLADLERMLHLFSGKPIPDNRENITLRLDDHIQSVQGKEDYED HHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCHHH EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV HHHHHHEEECCCCEEEEECHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure SAITLSHPEVVNGHTDVICSTSVSHILAVRKSTLLQIDTLIRQLAEISSMTESIGGKTA CCEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDAQARDTWYRSL CCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHC EYDNFPEVSEANILSTFEQLHQNKDEVFERGVINVFRGLSWNYKTNCPCKFGSKIIVNNL CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHH VRWDRWGFHLITGHQVDRLADLERMLHLFSGKPIPDNRENITLRLDDHIQSVQGKEDYED HHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHCCCCCCHHH EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV HHHHHHEEECCCCEEEEECHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA