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The map label for this gene is dgoA [H]

Identifier: 170681749

GI number: 170681749

Start: 1111758

End: 1112375

Strand: Reverse

Name: dgoA [H]

Synonym: EcSMS35_1096

Alternate gene names: 170681749

Gene position: 1112375-1111758 (Counterclockwise)

Preceding gene: 170682572

Following gene: 170680994

Centisome position: 21.95

GC content: 58.9

Gene sequence:

>618_bases
ATGCAGTGGCAAACTAAACTCCCGCTGATCGCCATTTTGCGCGGCATTACGCCCGACGAGGCGCTGGTGCATGTTGGCGC
GGTGATTGACGCCGGGTTCGACGCAGTTGAAATCCCGCTGAATTCCCCACAATGGGAGCAGAGCATTCCCGCCATCGTTG
ATGCGTATGGCGACAAGGCGTTGATTGGCGCAGGTACGGTACTGAAACCTGAACAGGTCGATGTGCTCGCCAGGATGGGC
TGCCAGCTCATCGTTACGCCCAATATCCATAGTGAAGTGATCCGCCGTGCGGTGGGCTACGGCATGACCGTTTGCCCCGG
CTGCGCGACGGCGACCGAAGCCTTTACCGCGCTCGACGCGGGCGCTCAGGCGCTGAAAATATTTCCGTCATCGGCTTTTG
GTCCGCAATACATCAAAGCGTTAAAAGCGGTATTACCACCGGACATCGCAGTCTTTGCCGTTGGCGGCGTGACGCCAGAA
AACCTGGCGCAGTGGATAGACGCAGGTTGTGCAGGGGCAGGCTTAGGCAGCGATCTCTATCGCGCCGGGCAGTCCGTAGA
ACGCACCGCGCAGCAGGCAGCAGCATTTGTTAAGGCGTATCGAGAGGCAGTGCAATGA

Upstream 100 bases:

>100_bases
CTGACCGCGCGCTACCAGCAAGCCTTTCAGGCGATGGGTTGCGACGTGGCGGTGGTGGCGGGCGACAAGGCATTTCAGGC
TGGTATAAGGAGCATCGCTC

Downstream 100 bases:

>100_bases
AAATCACCAAAATTACCACGTATCGTTTACCTCCCCGCTGGATGTTCCTGAAAATTGAAACCGATGAAGGCGTGGTCGGC
TGGGGCGAGCCCGTGATCGA

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MQWQTKLPLIAILRGITPDEALVHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDVLARMG
CQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALDAGAQALKIFPSSAFGPQYIKALKAVLPPDIAVFAVGGVTPE
NLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ

Sequences:

>Translated_205_residues
MQWQTKLPLIAILRGITPDEALVHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDVLARMG
CQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALDAGAQALKIFPSSAFGPQYIKALKAVLPPDIAVFAVGGVTPE
NLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ
>Mature_205_residues
MQWQTKLPLIAILRGITPDEALVHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDVLARMG
CQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALDAGAQALKIFPSSAFGPQYIKALKAVLPPDIAVFAVGGVTPE
NLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAVQ

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=205, Percent_Identity=98.0487804878049, Blast_Score=406, Evalue=1e-115,
Organism=Escherichia coli, GI1788156, Length=150, Percent_Identity=27.3333333333333, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 21443; Mature: 21443

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWQTKLPLIAILRGITPDEALVHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKA
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCHHHHHHCCCCE
LIGAGTVLKPEQVDVLARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALDA
EECCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHC
GAQALKIFPSSAFGPQYIKALKAVLPPDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLY
CCHHEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHH
RAGQSVERTAQQAAAFVKAYREAVQ
HCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQWQTKLPLIAILRGITPDEALVHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKA
CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHCHHHHHHCCCCE
LIGAGTVLKPEQVDVLARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALDA
EECCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHC
GAQALKIFPSSAFGPQYIKALKAVLPPDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLY
CCHHEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCHHHH
RAGQSVERTAQQAAAFVKAYREAVQ
HCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]