| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is epsJ [H]
Identifier: 170681557
GI number: 170681557
Start: 2283048
End: 2284208
Strand: Reverse
Name: epsJ [H]
Synonym: EcSMS35_2262
Alternate gene names: 170681557
Gene position: 2284208-2283048 (Counterclockwise)
Preceding gene: 170679591
Following gene: 170681490
Centisome position: 45.07
GC content: 44.96
Gene sequence:
>1161_bases ATGTCTGAAAAAGAGAGTATAGCTGTTTCCGTTATTATCCCTGTGCACAATGCGGCGGGATATATTTCCGACACATTGAG CACTGTTTTGTCGCAAACATTAAATGATATTGAAATCATTATTGTCAACGATTGTTCTGACGATAATACCTTAGAGATTG TCTCGGCGCTGGCTGAAACTGATTCACGAATTAGAGTCATTAACAACACGACAAATCTTGGTGGGGGAGGCTCAAGAAAC ATCGGGTTGGATGCTGCTACCGGTGAGTACGTTATTTTTCTTGATGACGACGATTATGTCGATAACATGATGTTGGAGCG CATGTACGCACGTGCTAGCGATATACAAGCGGATGTCGTTATCTGTCGCAGCCAGTCTTTTGATCCCGCCTTGCAGGTTT ATGCTCCGATGCCGTGGTCAGTGCGCCAGGAGCTGTTACCTGATCTCAAGTTTTTTTCATCCCAGGATATTCCCTCTGAC TTTTTCCGCACCTTTGTCTGGTGGCCATGGGACAAGCTTCTCAGGCGTCAATTTATTACTAGTCATCAGCTTCGCTTTCA GGAAATCAGGACGACCAACGATCTTTTCTTCGTCTGCGCATTTATGCTCATGGCGAACAGAATTTCGGTCTTAAATGAAA CGTTAATTTCTCATACCATCAACCGTAGTGAATCCCTATCCGCCACGCGAGCAGAGTCGCACCGCTGTGCTGTTGAAGCA TTGGTGGCGCTTAAAGCGTTTATCTGTCAGCAGGGGATGATGGAACACCGTCTCAGAGATTATAAAAACTATGTTGTCGT GTTCCTTGAGTGGCATTTAAACACGATTTCTGGTCCGGCATTTCACCCGTTTTATCAGCAAGTGAAAGAGTTTGTTGTTG CCCTGGATGCAAAGAGTGATGATTTTTATGATGAATTTATCGCCGCCGCCCATCATAGGATCACCACGCTGTCAGCTGAA GAGTACCTATTCTCTCTTAAAGATCGGGTTCTGAAGGAACTTGAGTTTTTCCAGGCCAGGAGCTCCGCATTACAGCAAGA AGTTGAGACGCTTACCCACTCATTAGCCGGGCAAAAGGATGAAAATGCGATATTGCATAATCAATTGCATGAGATTGAAG AGCGGGTAACGGCTTTGTTGAATAAATCGAACTTTTGCTGA
Upstream 100 bases:
>100_bases TTTCATCTTACCCATCCTTAATAAACTGGCAACCTACAAATTAAACGCTACCCATAAATAAATATAATTACGTTTATAAG CTAAGCGTCAAGGTGATTGC
Downstream 100 bases:
>100_bases GTTGAAGGATCAGATCACGTATCTTCCCGACAACGCAGACCGTTCCGTGGCAAAGCAAAAGTTCAAAATCACCAACTGGC CCACCTACAATAAAGCCCTC
Product: glycosyl transferase, group 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSEKESIAVSVIIPVHNAAGYISDTLSTVLSQTLNDIEIIIVNDCSDDNTLEIVSALAETDSRIRVINNTTNLGGGGSRN IGLDAATGEYVIFLDDDDYVDNMMLERMYARASDIQADVVICRSQSFDPALQVYAPMPWSVRQELLPDLKFFSSQDIPSD FFRTFVWWPWDKLLRRQFITSHQLRFQEIRTTNDLFFVCAFMLMANRISVLNETLISHTINRSESLSATRAESHRCAVEA LVALKAFICQQGMMEHRLRDYKNYVVVFLEWHLNTISGPAFHPFYQQVKEFVVALDAKSDDFYDEFIAAAHHRITTLSAE EYLFSLKDRVLKELEFFQARSSALQQEVETLTHSLAGQKDENAILHNQLHEIEERVTALLNKSNFC
Sequences:
>Translated_386_residues MSEKESIAVSVIIPVHNAAGYISDTLSTVLSQTLNDIEIIIVNDCSDDNTLEIVSALAETDSRIRVINNTTNLGGGGSRN IGLDAATGEYVIFLDDDDYVDNMMLERMYARASDIQADVVICRSQSFDPALQVYAPMPWSVRQELLPDLKFFSSQDIPSD FFRTFVWWPWDKLLRRQFITSHQLRFQEIRTTNDLFFVCAFMLMANRISVLNETLISHTINRSESLSATRAESHRCAVEA LVALKAFICQQGMMEHRLRDYKNYVVVFLEWHLNTISGPAFHPFYQQVKEFVVALDAKSDDFYDEFIAAAHHRITTLSAE EYLFSLKDRVLKELEFFQARSSALQQEVETLTHSLAGQKDENAILHNQLHEIEERVTALLNKSNFC >Mature_385_residues SEKESIAVSVIIPVHNAAGYISDTLSTVLSQTLNDIEIIIVNDCSDDNTLEIVSALAETDSRIRVINNTTNLGGGGSRNI GLDAATGEYVIFLDDDDYVDNMMLERMYARASDIQADVVICRSQSFDPALQVYAPMPWSVRQELLPDLKFFSSQDIPSDF FRTFVWWPWDKLLRRQFITSHQLRFQEIRTTNDLFFVCAFMLMANRISVLNETLISHTINRSESLSATRAESHRCAVEAL VALKAFICQQGMMEHRLRDYKNYVVVFLEWHLNTISGPAFHPFYQQVKEFVVALDAKSDDFYDEFIAAAHHRITTLSAEE YLFSLKDRVLKELEFFQARSSALQQEVETLTHSLAGQKDENAILHNQLHEIEERVTALLNKSNFC
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=267, Percent_Identity=26.5917602996255, Blast_Score=92, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 44099; Mature: 43968
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKESIAVSVIIPVHNAAGYISDTLSTVLSQTLNDIEIIIVNDCSDDNTLEIVSALAET CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC DSRIRVINNTTNLGGGGSRNIGLDAATGEYVIFLDDDDYVDNMMLERMYARASDIQADVV CCCEEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEE ICRSQSFDPALQVYAPMPWSVRQELLPDLKFFSSQDIPSDFFRTFVWWPWDKLLRRQFIT EEECCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHH SHQLRFQEIRTTNDLFFVCAFMLMANRISVLNETLISHTINRSESLSATRAESHRCAVEA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LVALKAFICQQGMMEHRLRDYKNYVVVFLEWHLNTISGPAFHPFYQQVKEFVVALDAKSD HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC DFYDEFIAAAHHRITTLSAEEYLFSLKDRVLKELEFFQARSSALQQEVETLTHSLAGQKD HHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ENAILHNQLHEIEERVTALLNKSNFC CCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SEKESIAVSVIIPVHNAAGYISDTLSTVLSQTLNDIEIIIVNDCSDDNTLEIVSALAET CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHC DSRIRVINNTTNLGGGGSRNIGLDAATGEYVIFLDDDDYVDNMMLERMYARASDIQADVV CCCEEEEECCCCCCCCCCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEEEE ICRSQSFDPALQVYAPMPWSVRQELLPDLKFFSSQDIPSDFFRTFVWWPWDKLLRRQFIT EEECCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHH SHQLRFQEIRTTNDLFFVCAFMLMANRISVLNETLISHTINRSESLSATRAESHRCAVEA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LVALKAFICQQGMMEHRLRDYKNYVVVFLEWHLNTISGPAFHPFYQQVKEFVVALDAKSD HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC DFYDEFIAAAHHRITTLSAEEYLFSLKDRVLKELEFFQARSSALQQEVETLTHSLAGQKD HHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ENAILHNQLHEIEERVTALLNKSNFC CCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]