| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is 170681390
Identifier: 170681390
GI number: 170681390
Start: 4279850
End: 4280752
Strand: Reverse
Name: 170681390
Synonym: EcSMS35_4180
Alternate gene names: NA
Gene position: 4280752-4279850 (Counterclockwise)
Preceding gene: 170680837
Following gene: 170682654
Centisome position: 84.46
GC content: 47.4
Gene sequence:
>903_bases ATGAAAAAAACGCTCGCAACGTTATTTTTATTAACGTGTCTGGGATCATCATCCGCCTATGCGGATAACGCTTTGATTTT ACAAACTGATTTTAGCCTGAAAGATGGTGCCGTCTCGGCGATGAAAGGGGTCGCATTCGGCGTTGACCATAATCTTAAAA TCTTTGATTTAACACACGAAATTCCACCGTATAACATCTGGGAAGGCGCTTATCGCCTGTATCAGACTGCCAGTTACTGG CCGCAAGGTTCGGTGTTTGTTAGCGTGGTCGATCCGGGCGTAGGCACTGACCGTAAATCGGTAGTGCTGAAAACCAAAAA CGGTCAATACTTCGTTTCACCAGATAACGGTACGCTCACTTTGGTGGCACAAACTCTGGGTATTGATAGCGTCCGAGAAA TCGACGAAAAAGCTAACCGCCTGAAAGGTTCTGAAAAGTCATATACCTTCCACGGTCGTGACGTGTATGCCTACACCGGT GCGCGTCTGGCTTCCGGGGCGATTACGTTCGAACAGGTGGGGCCAGAGCTTCCTGCAAAAGTTGTCGAACTTTCTTATCA GAAAGCAAAAGCAACAAAAGGTGAAGTGAAGGGCAATATCCCGATTCTCGATATTCAGTACGGCAACGTCTGGAGCAATA TCAGCGACGAGTTGCTGAATCAGGCAGGAATCAAACTCAACGACACGTTGTGTGTGACCATTTCCGAAGGTTCCCAGCAA AAATACGCAGGGAAAATGCCATATGTCGCAAGCTTCGGCGATGTGCCGGAAGGCCAGCCGATGGTGTATCTGAACAGCTT ATTGAATGTTTCCGTGGCGCTGAATATGGATAATTTTGCGCAGAAACATCAGGTTGCGTCTGGTGCTGACTGGAATATTG ATGTGAAGAAGTGCGCTAAGTAA
Upstream 100 bases:
>100_bases GTCGAGTGGAAAGGTTAAGCATTGTACACTCGAGGAGGCCAGACAAACTGGGACTGGCTACACAGCTGGAAAATCATCAG ATAAATGAAGGGAAACAAAA
Downstream 100 bases:
>100_bases GGTGCTGATGCCGAATGCGGTGTGGCGCACCGCATCCTGCAACGGAGTTGTAAATTACACCGTCTCCAGTCGGGCATAAG CCGCCACCAGCCATTTAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGVAFGVDHNLKIFDLTHEIPPYNIWEGAYRLYQTASYW PQGSVFVSVVDPGVGTDRKSVVLKTKNGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTG ARLASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDELLNQAGIKLNDTLCVTISEGSQQ KYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNMDNFAQKHQVASGADWNIDVKKCAK
Sequences:
>Translated_300_residues MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGVAFGVDHNLKIFDLTHEIPPYNIWEGAYRLYQTASYW PQGSVFVSVVDPGVGTDRKSVVLKTKNGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTG ARLASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDELLNQAGIKLNDTLCVTISEGSQQ KYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNMDNFAQKHQVASGADWNIDVKKCAK >Mature_300_residues MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGVAFGVDHNLKIFDLTHEIPPYNIWEGAYRLYQTASYW PQGSVFVSVVDPGVGTDRKSVVLKTKNGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTG ARLASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDELLNQAGIKLNDTLCVTISEGSQQ KYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNMDNFAQKHQVASGADWNIDVKKCAK
Specific function: Unknown
COG id: COG1912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002747 - InterPro: IPR023227 - InterPro: IPR023228 [H]
Pfam domain/function: PF01887 DUF62 [H]
EC number: NA
Molecular weight: Translated: 32652; Mature: 32652
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGVAFGVDHNLKIFDLTHE CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCCCCEEEEEEECC IPPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVVLKTKNGQYFVSPDNGTLT CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCCCCEEE LVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTGARLASGAITFEQVGPELPAK EEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCHHCCCEEHHHCCCCCCHH VVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDELLNQAGIKLNDTLCVTISEGSQQ HHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEECCEEEEEECCCCCH KYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNMDNFAQKHQVASGADWNIDVKKCAK HHCCCCCEEEECCCCCCCCCEEEEEHHEEEEEEECCHHHHHHHHHCCCCCCCEEHHHHCC >Mature Secondary Structure MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGVAFGVDHNLKIFDLTHE CCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHEEECCCCCEEEEEEECC IPPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVVLKTKNGQYFVSPDNGTLT CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEECCCCCEEE LVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTGARLASGAITFEQVGPELPAK EEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCEEEEECCCCHHCCCEEHHHCCCCCCHH VVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDELLNQAGIKLNDTLCVTISEGSQQ HHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEECCEEEEEECCCCCH KYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNMDNFAQKHQVASGADWNIDVKKCAK HHCCCCCEEEECCCCCCCCCEEEEEHHEEEEEEECCHHHHHHHHHCCCCCCCEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]