Click here to switch to the map view.

The map label for this gene is gspH [H]

Identifier: 170681274

GI number: 170681274

Start: 3314362

End: 3314925

Strand: Reverse

Name: gspH [H]

Synonym: EcSMS35_3243

Alternate gene names: 170681274

Gene position: 3314925-3314362 (Counterclockwise)

Preceding gene: 170681001

Following gene: 170679735

Centisome position: 65.4

GC content: 54.26

Gene sequence:

>564_bases
GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA
GACGTTTGCGACCGCTTCAGAGCCGCCTGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACA
GGGCAGTGATCGAAGGGCAAACACTCGGTGTGCTAATCGACCCGCCAGGTTACCAGTTTATGCAGCGTCGTCACGGGCAA
TGGTTGCCCGTTTCTGCGACCCGGTTATCGGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGCAG
TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAGCGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAA
AAGAGGCGAAAAAGAAGACACCGCAGATCCGTTTTTCGCCTTTTGAACCTGTCACGCCGTTTACACTACGTTTTTACTCG
TCGGCACAAAACGCGTGTTGGGCGGTAAAGCTGGCGCACGATGGCGCGTTATCTCTCAATCAATGTGATGAGGGGATGCC
ATGA

Upstream 100 bases:

>100_bases
GCTGTTTGATGTTTATACCCTGGGAGCAGATGGTCAGGAAAACGGGGAGGGCGCTGGCGCAGATATCGGTAACTGGAATT
TGCAGGAGTTTCAGTAATCA

Downstream 100 bases:

>100_bases
AGCGTGGATTTACCTTGCTGGAAGTAATACTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGATTGCC
AGCGGTGCGCTGAGTAATCA

Product: general secretion pathway protein GspH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPERGFTLLEIMLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRHGQ
WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPVTPFTLRFYS
SAQNACWAVKLAHDGALSLNQCDEGMP

Sequences:

>Translated_187_residues
MPERGFTLLEIMLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRHGQ
WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPVTPFTLRFYS
SAQNACWAVKLAHDGALSLNQCDEGMP
>Mature_186_residues
PERGFTLLEIMLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRHGQW
LPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPVTPFTLRFYSS
AQNACWAVKLAHDGALSLNQCDEGMP

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP H family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002416
- InterPro:   IPR012902
- InterPro:   IPR001120
- InterPro:   IPR022346 [H]

Pfam domain/function: PF12019 GspH [H]

EC number: NA

Molecular weight: Translated: 21085; Mature: 20954

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERGFTLLEIMLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQ
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCC
TLGVLIDPPGYQFMQRRHGQWLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQR
EEEEEECCCCHHHHHHHCCCCCCCHHHHEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHH
RRLTLHDIELELQKEAKKKTPQIRFSPFEPVTPFTLRFYSSAQNACWAVKLAHDGALSLN
HCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCHH
QCDEGMP
CCCCCCC
>Mature Secondary Structure 
PERGFTLLEIMLVIFLIGLASAGVVQTFATASEPPAKKAAQDFLTRFAQFKDRAVIEGQ
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCC
TLGVLIDPPGYQFMQRRHGQWLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQR
EEEEEECCCCHHHHHHHCCCCCCCHHHHEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHH
RRLTLHDIELELQKEAKKKTPQIRFSPFEPVTPFTLRFYSSAQNACWAVKLAHDGALSLN
HCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCHH
QCDEGMP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407845 [H]