| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
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The map label for this gene is yeeV [H]
Identifier: 170681113
GI number: 170681113
Start: 1074826
End: 1075089
Strand: Reverse
Name: yeeV [H]
Synonym: EcSMS35_1059
Alternate gene names: 170681113
Gene position: 1075089-1074826 (Counterclockwise)
Preceding gene: 170683206
Following gene: 170682087
Centisome position: 21.21
GC content: 53.03
Gene sequence:
>264_bases ATGAAAACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTGTC CCGACTGCTGGACCAGCACTATGGCCTCACACAGAATGACACACCTTTTGCCGATGAACGTGTGATTGAGCAGCATATTG AGGCAGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTGGAAAAATACGCGCTGGTGCTACCGACCAGCCGGGATTCA GCGCCTGTACCCGCTCTCAGTTAA
Upstream 100 bases:
>100_bases ATGAAAAATTAACTCTCCAGAATAGCCTTCTGCTACGGCCTGGTGTTTTCACCACGCCACTTTTCCATTTTTATATCTGC ATATCAGGAAAATCTTCAGT
Downstream 100 bases:
>100_bases TAAACAGCATCGATATCCTCCGGGCTCGCAGGGCGACCGGCCTGATGACCCGCGACAATTACAGAACGGTAAATAACATT ACCCTGGGTAAGTATCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTQNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVLPTSRDS APVPALS
Sequences:
>Translated_87_residues MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTQNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVLPTSRDS APVPALS >Mature_87_residues MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTQNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVLPTSRDS APVPALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli ypjF and ykfI [H]
Homologues:
Organism=Escherichia coli, GI1788315, Length=73, Percent_Identity=98.6301369863014, Blast_Score=151, Evalue=8e-39, Organism=Escherichia coli, GI1788999, Length=73, Percent_Identity=68.4931506849315, Blast_Score=106, Evalue=3e-25, Organism=Escherichia coli, GI1786439, Length=73, Percent_Identity=65.7534246575342, Blast_Score=103, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009610 [H]
Pfam domain/function: PF06755 DUF1219 [H]
EC number: NA
Molecular weight: Translated: 9540; Mature: 9540
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTQNDTPFADERVIEQHIEAGISLC CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH DAVNFLVEKYALVLPTSRDSAPVPALS HHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKTLPVLPGQAASSRPSPVEIWQILLSRLLDQHYGLTQNDTPFADERVIEQHIEAGISLC CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH DAVNFLVEKYALVLPTSRDSAPVPALS HHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]