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The map label for this gene is 170680904

Identifier: 170680904

GI number: 170680904

Start: 4773819

End: 4774295

Strand: Reverse

Name: 170680904

Synonym: EcSMS35_4676

Alternate gene names: NA

Gene position: 4774295-4773819 (Counterclockwise)

Preceding gene: 170681538

Following gene: 170679845

Centisome position: 94.2

GC content: 39.83

Gene sequence:

>477_bases
ATGCGAAATATAATTAGATCTATTAATGCTCTGCTTGCAACATTGAATATTACCATTTTGGCGATCATTGTGGCATGTGT
GACATGGCAAGTGGTAGCACGATTTATATTTAAAAGCCCCAGTATATTTACGGATGAACTCAGTCGTTTGCTTTTTATTT
GCCTTGGCCTTTTTGGTGGTGCCTATACCGCGGGGCAGAACCGGCATCTGGCGATTGATCTGCTTCCTATGATGCTGAAA
GGAAAAGCCCGGCGTCATTTATTTTTGTGTATTCAGATTATCGTTATTATCTTCTCTACCATCATTATGGTATATGGTGG
TGGGCTATTAACGCTGGACACATTCGATTCAGGTCAAACCTCACCCGCTTTAGGCTGGCAGATGGGATATATCTATATGA
GTATCCCGATTAGTGGTGTTCTTATTATTATATACACCATAGATATGGTTTTAACAGAACTTAAACAACCACTCTAA

Upstream 100 bases:

>100_bases
CCACTATCCGCGGCATTTGGTTTGAAAAAAACTGGCCTGGCTTTCTTAATGGGACAATTTACCAGCCACAGGATGAATGA
TATTGCAAAGGTTAATCACT

Downstream 100 bases:

>100_bases
AGATAATAAACAACAACCAACCATAGTAGGAATGGAGAAATTATGGATTACTGGTTACCGATTATTGTGTTATTTGGTGC
CTTCTTTTTTATGTTGGCAT

Product: TRAP transporter, DctQ-like membrane protein

Products: NA

Alternate protein names: C4-Dicarboxylate Transport System Permease Small Protein; TRAP Transporter DctQ-Like Membrane Protein; Aspartate Kinase Monofunctional Class; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Inner Membrane Protein; C4-Dicarboxylate Transport System; TRAP Transporter Small Transmembrane Protein; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRNIIRSINALLATLNITILAIIVACVTWQVVARFIFKSPSIFTDELSRLLFICLGLFGGAYTAGQNRHLAIDLLPMMLK
GKARRHLFLCIQIIVIIFSTIIMVYGGGLLTLDTFDSGQTSPALGWQMGYIYMSIPISGVLIIIYTIDMVLTELKQPL

Sequences:

>Translated_158_residues
MRNIIRSINALLATLNITILAIIVACVTWQVVARFIFKSPSIFTDELSRLLFICLGLFGGAYTAGQNRHLAIDLLPMMLK
GKARRHLFLCIQIIVIIFSTIIMVYGGGLLTLDTFDSGQTSPALGWQMGYIYMSIPISGVLIIIYTIDMVLTELKQPL
>Mature_158_residues
MRNIIRSINALLATLNITILAIIVACVTWQVVARFIFKSPSIFTDELSRLLFICLGLFGGAYTAGQNRHLAIDLLPMMLK
GKARRHLFLCIQIIVIIFSTIIMVYGGGLLTLDTFDSGQTSPALGWQMGYIYMSIPISGVLIIIYTIDMVLTELKQPL

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17553; Mature: 17553

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNIIRSINALLATLNITILAIIVACVTWQVVARFIFKSPSIFTDELSRLLFICLGLFGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
AYTAGQNRHLAIDLLPMMLKGKARRHLFLCIQIIVIIFSTIIMVYGGGLLTLDTFDSGQT
CCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
SPALGWQMGYIYMSIPISGVLIIIYTIDMVLTELKQPL
CCCCCHHHHHEEEEECHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNIIRSINALLATLNITILAIIVACVTWQVVARFIFKSPSIFTDELSRLLFICLGLFGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
AYTAGQNRHLAIDLLPMMLKGKARRHLFLCIQIIVIIFSTIIMVYGGGLLTLDTFDSGQT
CCCCCCCCEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
SPALGWQMGYIYMSIPISGVLIIIYTIDMVLTELKQPL
CCCCCHHHHHEEEEECHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA