| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
Click here to switch to the map view.
The map label for this gene is 170680834
Identifier: 170680834
GI number: 170680834
Start: 407430
End: 407609
Strand: Reverse
Name: 170680834
Synonym: EcSMS35_0393
Alternate gene names: NA
Gene position: 407609-407430 (Counterclockwise)
Preceding gene: 170680798
Following gene: 170680287
Centisome position: 8.04
GC content: 32.78
Gene sequence:
>180_bases ATGATTGTCTGCTCCCCTGTCTTGTTATGGGAGCAGTATTCAGGAATAAAAACATTCATTAAAAGAATTAGTCGTTATCG CACAGATGATTTTATTCTTAGCAAAAAAACGGCAAAGGAAAGATTAAATATGCAATTACTCCGTTCTAACAATTGGGAAA ATTACTACACTTCATTTTAG
Upstream 100 bases:
>100_bases TTCGGCGGAGGTTTGATACGCCACGGTGACGTTCACCGCCTGCGCCTGAAAAGCGATGAATGCCAGTGCGGCAAGAAGTG TGTTACGCGATGAAATTGCC
Downstream 100 bases:
>100_bases TGATGCATAAACAACCACATTACGAGATTTATTACTTCATTATTTCTATCAATATCAATACATATAATAAAACTATTATA TTCGCATTGTATATATCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MIVCSPVLLWEQYSGIKTFIKRISRYRTDDFILSKKTAKERLNMQLLRSNNWENYYTSF
Sequences:
>Translated_59_residues MIVCSPVLLWEQYSGIKTFIKRISRYRTDDFILSKKTAKERLNMQLLRSNNWENYYTSF >Mature_59_residues MIVCSPVLLWEQYSGIKTFIKRISRYRTDDFILSKKTAKERLNMQLLRSNNWENYYTSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7197; Mature: 7197
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVCSPVLLWEQYSGIKTFIKRISRYRTDDFILSKKTAKERLNMQLLRSNNWENYYTSF CEECCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIVCSPVLLWEQYSGIKTFIKRISRYRTDDFILSKKTAKERLNMQLLRSNNWENYYTSF CEECCHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA