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The map label for this gene is fliD [H]

Identifier: 170680620

GI number: 170680620

Start: 1254099

End: 1255505

Strand: Reverse

Name: fliD [H]

Synonym: EcSMS35_1257

Alternate gene names: 170680620

Gene position: 1255505-1254099 (Counterclockwise)

Preceding gene: 170681651

Following gene: 170680836

Centisome position: 24.77

GC content: 51.95

Gene sequence:

>1407_bases
ATGGCAAGTATTTCATCGCTGGGAGTCGGGTCAGGTCTGGATTTAAGTTCAATCCTTGATAGCCTCACCGCCGCGCAAAA
AGCGACGCTAACCCCTATTTCAAATCAGCAATCGTCGTTTACCGCTAAACTTAGCGCCTACGGTACGCTGAAAAGCGCGC
TGACGACTTTCCAGACCGCCAATACTGCATTGTCTAAAGCCGATCTTTTTTCCGCCACCAGCACTACCAGCAGCACCACC
GCGTTCAGTGCCACCACCGCGGGTAACGCCATCGCCGGGAAATACACCATCAGTGTCACCCATCTGGCGCAGGCGCAAAC
CCTGACCACGCGCACCACCAGAGACGATACGAAAACGGCGATCGCCACCAGCGACAGTAAACTCACCATTCAACAAGGCG
GCGACAAAGATCCGATTACCATTGATATCAGCGCGGCTAACTCGTCGTTAAGCGGGATCCGTGATGCCATCAACAATGCA
AAAGCAGGCGTAAGCGCAAGCATCATTAACGTGGGTAACGGTGAATATCGTCTGTCAGTCACATCAAATGACACCGGCCT
TGATAATGCGATGACACTCTCGGTCAGCGGTGATGATGCGCTACAAAGTTTTATGGGCTATGACGCCAGTGCCAGCAGCA
ACGGTATGGAAGTCTCGGTCGCCGCCCAGAATGCGCAGCTGACGGTCAACAACGTCGCCATTGAGAACAGCAGCAACACC
ATCAGCGACGCGCTGGAAAACATCACCCTGAACCTGAACGATGTCACCACGGGCAACCAGACGCTAACCATCACTCAGGA
CACCTCCAAAGCGCAAACAGCGATTAAAGACTGGGTGAATGCCTATAACTCGCTAATAGATACCTTCAGCAGCCTGACCA
AATACACCGCCGTAGATGCGGGAGCTGATAGCCAGAGTTCTAGCAATGGCGCACTGCTCGGCGACTCCACGTTGCGGACG
ATTCAGACGCAGTTGAAGTCGATGCTGAGTAATACCGTCAGTTCTTCCAACTATAAAACGCTGGCGCAGATTGGTATCAC
GACCGATCCCAGCGATGGCAAACTGGAACTGGATGCCGACAAACTCACCGCTGCACTGAAAAAAGATGCCAGCGGCGTAG
GTGCATTGATTGTTGGCGATGGTAAAAAAACCGGCATCACGACCACCATCGGCAGCAACCTGACCAGTTGGCTTTCGACA
ACGGGCATTATTAAAGCCGCTACCGATGGCGTTAGTAAGACCCTGAATAAATTAACTAAAGACTACAACGCCGCCAGCGA
TCGCATTGATGCGCAGGTCGCGCGCTATAAAGAACAATTTACCCAACTGGACGTTTTAATGACCTCGTTAAACAGCACCA
GCAGCTACTTAACGCAGCAGTTCGAAAACAACAGTAATTCCAAGTAA

Upstream 100 bases:

>100_bases
ATTCCCGCTATTAAAAAAAACAATTAAACGTAAACTTTGCGCAATTCAGGCCGATAACCCCGGTATTCGTTTTACGTGTC
GAAAGATAAAAGGAAATCGC

Downstream 100 bases:

>100_bases
TCAATATTCATCGGGAGACAGGTCATGTACGCGGCAAAAGGCACCCAGGCCTATGCACAAATTGGCGTCGAAAGCGCCGT
AATGAGCGCCAGCCAGCAGC

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTT
AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT
ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRT
IQTQLKSMLSNTVSSSNYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST
TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK

Sequences:

>Translated_468_residues
MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTT
AFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT
ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRT
IQTQLKSMLSNTVSSSNYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLST
TGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK
>Mature_467_residues
ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTA
FSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAK
AGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNTI
SDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTI
QTQLKSMLSNTVSSSNYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTT
GIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=468, Percent_Identity=99.7863247863248, Blast_Score=903, Evalue=0.0,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48484; Mature: 48353

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA
CCCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA
HHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECEEEEEEEEHHHHHHEEECCCCCCCCEE
IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV
EEECCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEE
TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT
ECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCH
ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA
HHHHHHHEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSNYKTLAQIGITTDPSDGKLELDAD
CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEECCCCCEEEECHH
KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK
HHHHHHHHCCCCCEEEEECCCCCCCEEEECCCHHHHHHHHCCEEEEHHHHHHHHHHHHHH
DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKLSAYGTLKSALTTFQTA
CCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHH
NTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHLAQAQTLTTRTTRDDTKTA
HHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECEEEEEEEEHHHHHHEEECCCCCCCCEE
IATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNAKAGVSASIINVGNGEYRLSV
EEECCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEE
TSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEVSVAAQNAQLTVNNVAIENSSNT
ECCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCH
ISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIKDWVNAYNSLIDTFSSLTKYTAVDA
HHHHHHHEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
GADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVSSSNYKTLAQIGITTDPSDGKLELDAD
CCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECEECCCCCEEEECHH
KLTAALKKDASGVGALIVGDGKKTGITTTIGSNLTSWLSTTGIIKAATDGVSKTLNKLTK
HHHHHHHHCCCCCEEEEECCCCCCCEEEECCCHHHHHHHHCCEEEEHHHHHHHHHHHHHH
DYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1527488; 9097040; 9278503; 2659972; 6305924 [H]