| Definition | Escherichia coli SMS-3-5 chromosome, complete genome. |
|---|---|
| Accession | NC_010498 |
| Length | 5,068,389 |
Click here to switch to the map view.
The map label for this gene is aroK [H]
Identifier: 170680023
GI number: 170680023
Start: 3725332
End: 3726009
Strand: Reverse
Name: aroK [H]
Synonym: EcSMS35_3666
Alternate gene names: 170680023
Gene position: 3726009-3725332 (Counterclockwise)
Preceding gene: 170681657
Following gene: 170680643
Centisome position: 73.51
GC content: 47.94
Gene sequence:
>678_bases ATGGGTGATTTATTCAGTTGCCAAACCCGCTGGAGTATTGAGATAATTTTCAGTCTGACTCTCGCAATATCTTATGAGGT TTCAGTTCATGTCCTGCGGCGCTCTCTGAGCGAAGCGGGTTTATCATTAACGAATAGTCTTAGTAGTACCGAAAAAATGG CAGAGAAACGCAATATCTTTCTGGTTGGGCCTATGGGTGCCGGAAAAAGCACTATTGGGCGCCAGTTAGCTCAACAACTC AATATGGAATTTTACGATTCCGATCAAGAGATTGAGAAACGAACCGGAGCTGATGTGGGCTGGGTTTTCGATTTAGAAGG CGAAGAAGGCTTCCGCGATCGCGAAGAAAAGGTCATCAATGAGTTGACCGAGAAACAGGGTATTGTGCTGGCTACTGGCG GCGGCTCTGTGAAATCCCGCGAAACGCGTAACCGTCTTTCCGCTCGTGGCGTTGTCGTTTATCTTGAAACGACCATCGAA AAGCAACTTGCACGCACGCAGCGTGATAAAAAACGCCCGTTGCTGCACGTTGAAACACCGCCGCGTGAAGTTCTGGAAGC GTTGGCCAATGAACGCAATCCGCTGTATGAAGAGATTGCCGACGTGACCATTCGTACTGATGATCAAAGCGCTAAAGTGG TCGCAAACCAGATTATTCACATGCTGGAAAGCAACTAA
Upstream 100 bases:
>100_bases GGCATTTTGCTGTCTTTTTTACGCTAATCTTACCCGGTGATTTATCGCCAGAGCGGTGGTAGCAAGGCAGCGCGCTTGCA GCGACCAGATATGCAGAGGG
Downstream 100 bases:
>100_bases TTCTGGCTTTATATACACTCGTCTGCGGGTACAGTAATTAAGGTGGATGTCGCGTTATGGAGAGGATTGTCGTTACTCTC GGGGAACGTAGTTACCCAAT
Product: shikimate kinase I
Products: NA
Alternate protein names: SK 1 [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGDLFSCQTRWSIEIIFSLTLAISYEVSVHVLRRSLSEAGLSLTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQL NMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN
Sequences:
>Translated_225_residues MGDLFSCQTRWSIEIIFSLTLAISYEVSVHVLRRSLSEAGLSLTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQL NMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIE KQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN >Mature_224_residues GDLFSCQTRWSIEIIFSLTLAISYEVSVHVLRRSLSEAGLSLTNSLSSTEKMAEKRNIFLVGPMGAGKSTIGRQLAQQLN MEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEK QLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=173, Percent_Identity=100, Blast_Score=354, Evalue=2e-99, Organism=Escherichia coli, GI1786587, Length=160, Percent_Identity=33.75, Blast_Score=88, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6320332, Length=186, Percent_Identity=31.1827956989247, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 25298; Mature: 25167
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDLFSCQTRWSIEIIFSLTLAISYEVSVHVLRRSLSEAGLSLTNSLSSTEKMAEKRNIF CCCCCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEE LVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVIN EEECCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH ELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETP HHHHHCCEEEEECCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCEEEECCC PREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN HHHHHHHHHCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure GDLFSCQTRWSIEIIFSLTLAISYEVSVHVLRRSLSEAGLSLTNSLSSTEKMAEKRNIF CCCCCCCCCCHHEEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEE LVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVIN EEECCCCCHHHHHHHHHHHCCCHHCCCHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHH ELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETP HHHHHCCEEEEECCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCEEEECCC PREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN HHHHHHHHHCCCCHHHHHHHCCEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA