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The map label for this gene is torT [H]

Identifier: 170680014

GI number: 170680014

Start: 2139341

End: 2140369

Strand: Reverse

Name: torT [H]

Synonym: EcSMS35_2129

Alternate gene names: 170680014

Gene position: 2140369-2139341 (Counterclockwise)

Preceding gene: 170682144

Following gene: 170680538

Centisome position: 42.23

GC content: 53.64

Gene sequence:

>1029_bases
ATGCGCGCACTGCTATTGTTACTTCTTTCCCTTTTCATGTTATCGGCATTTTCGGCTGATAACCTGTTGCGCTGGCATGA
TGCGCAGCATTTCTCGGTGCAAGCCTCTATGCCGCTTAAAGCCAAACGCGCATGGAAACTGTGCGCGCTTTATCCCAGCC
TGAAAGATTCATACTGGTTATCGTTGAACTATGGTATGCAGGAGGCTGCTCGCCGCTACGGTGTGGATTTAAAAGTGCTG
GAGGCAGGCGGCTACAGCCAGTTGGCTACCCAGCAAGCACAAATCGACCAGTGTAAACAGTGGGGCGCAGAGGCCATCTT
GCTCGGAAGTAGCACGACGTCATTTCCCGACCTGCAAAAGCAGGTAGCAAATCTGCCGGTGATCGAACTGGTGAATGCTA
TTGATGCTCCCCACGTGAAAAGCCGCGTTGGTGTGCCCTGGTTTCAGATGGGCTATCAACCAGGACGATATCTGGTGCAA
TGGAGCCACGGTAAACCACTGAACGTGCTGTTGATGCCCGGCCCCGATAACGCCGGGGGCAGTAAGGAGATGGTAGAGGG
TTTTCGCGCAGCCATTGCCGGAAGTCCGGTACGTATTGTTGATATTGCGCTCGGTGATAACGATATTGAAATCCAGCGTA
ACCTGTTGCAGGAGATGCTGGAGCGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATG
GGGGAAGGGCGTAACCTGAAAACACCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCG
GGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTGGCGGTTGAGCAGGCCATCAGGCAATTAC
AGGGGCAATCGGTGTCTGATAATGTCAGCCCACCGATTTTAGTTCTGACGCCGAAAAATGCCGACCGCGAACATATCCGC
CGCTCGCTGTCACCGGGGGGATTTCGTCCGGTCTATTATTATCAGCACACATCAGCGGCTAAGAAATAA

Upstream 100 bases:

>100_bases
GGTCAGGGTTAAATTCACGGTCGGTGCACTTAAGGTGAAAAAGGTTGAGTCGCAAAGCGGAATGCATCTAGCATAAAGCC
TTATTATTGATGAGGCTATC

Downstream 100 bases:

>100_bases
CCTTCGCCATGTTGTGTCACCAGTAAATCCGCGCTGAGTTTATGGCGTAAACGACGAATTAACACATCGACGGTGCGCAG
GTCAGGGTTTTCCACCCGAC

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRALLLLLLSLFMLSAFSADNLLRWHDAQHFSVQASMPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQ
WSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYYYQHTSAAKK

Sequences:

>Translated_342_residues
MRALLLLLLSLFMLSAFSADNLLRWHDAQHFSVQASMPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQ
WSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYYYQHTSAAKK
>Mature_342_residues
MRALLLLLLSLFMLSAFSADNLLRWHDAQHFSVQASMPLKAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQ
WSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYYYQHTSAAKK

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=327, Percent_Identity=98.1651376146789, Blast_Score=645, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37877; Mature: 37877

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLLLLLSLFMLSAFSADNLLRWHDAQHFSVQASMPLKAKRAWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQWSHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYYYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRALLLLLLSLFMLSAFSADNLLRWHDAQHFSVQASMPLKAKRAWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQWSHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYYYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]