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The map label for this gene is yedK [H]

Identifier: 170679801

GI number: 170679801

Start: 1248888

End: 1249556

Strand: Reverse

Name: yedK [H]

Synonym: EcSMS35_1250

Alternate gene names: 170679801

Gene position: 1249556-1248888 (Counterclockwise)

Preceding gene: 170680412

Following gene: 170682423

Centisome position: 24.65

GC content: 52.47

Gene sequence:

>669_bases
ATGTGTGGACGCTTTGCCCAATCCCAAACGCGTGAAGATTACCTTGCGCTTCTCGCGGAAGATATTGAACGCGATATTCC
CTATGATCCCGAACCCATTGGCAGATACAACGTCGCGCCGGGAACCAAAGTCCTACTGCTCAGTGAACGTGATGAACACC
TTCATCTGGATCCGGTTTTCTGGGGATATGCTCCCGGATGGTGGGATAAACCGCCGCTGATTAACGCCCGCGTAGAAACT
GCGGCGACCAGTCGTATGTTTAAACCGCTCTGGCAACATGGTCGGGCAATCTGTTTTGCCGATGGCTGGTTTGAGTGGAA
AAAAGAAGGCGACAAAAAGCAGCCTTATTTTATCTATCGTACTGATGGACAACCTGTTTTTATGGCCGCGATAGGCAGCA
CACCATTCGAGCGCGGTGACGAAGCCGAAGGATTTTTGATTGTCACTGCGGCGGCAGATCAAGGTCTGGTGGATATTCAT
GACCGCCGCCCACTGGTACTCTCGCCAGATGCTGCGCGGGAATGGATGCGGCAAGATATTGGCGGTAAAGAAGCCTCAGA
AATCGCTACCAGTGGTTGTGTGCCAGCAAACCAGTTCACCTGGCACCCGGTATCGCGCGCGGTGGGTAATGTTAAAAACC
AGGGCGCGGAGTTAATTCAACCTGTTTGA

Upstream 100 bases:

>100_bases
TCCCGCTGTGACCCACAGCGGGAACATCGTTACCTTTGTATCACATAGATTTTACCCACCCCCTCTCCTATTCTTTTCAG
TATGATCTCAGGAGGTTTCT

Downstream 100 bases:

>100_bases
TAAGCCTGGAGATTATTGATCAACAATACTGCGTCATAAGTAATCTCTATTAGACAAAGATTTCATTACCTGTTGGCATA
TTGCAAAAATAACACCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVET
AATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYRTDGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIH
DRRPLVLSPDAAREWMRQDIGGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAELIQPV

Sequences:

>Translated_222_residues
MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVET
AATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYRTDGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIH
DRRPLVLSPDAAREWMRQDIGGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAELIQPV
>Mature_222_residues
MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVET
AATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYRTDGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIH
DRRPLVLSPDAAREWMRQDIGGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAELIQPV

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YMR114C [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=235, Percent_Identity=28.0851063829787, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI54607104, Length=235, Percent_Identity=28.0851063829787, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI48994894, Length=222, Percent_Identity=96.3963963963964, Blast_Score=449, Evalue=1e-128,
Organism=Saccharomyces cerevisiae, GI6323761, Length=255, Percent_Identity=27.4509803921569, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24997; Mature: 24997

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEECCCCEEEECCEE
WGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYR
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCEEEEE
TDGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLSPDAAREWMRQDI
ECCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHC
GGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAELIQPV
CCCHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHCCHHHHCCC
>Mature Secondary Structure
MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKVLLLSERDEHLHLDPVF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEEECCCCEEEECCEE
WGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADGWFEWKKEGDKKQPYFIYR
ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCEEEEE
TDGQPVFMAAIGSTPFERGDEAEGFLIVTAAADQGLVDIHDRRPLVLSPDAAREWMRQDI
ECCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCEEECCHHHHHHHHHHC
GGKEASEIATSGCVPANQFTWHPVSRAVGNVKNQGAELIQPV
CCCHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8371104; 9278503 [H]