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The map label for this gene is yohN

Identifier: 170679655

GI number: 170679655

Start: 953723

End: 954061

Strand: Reverse

Name: yohN

Synonym: EcSMS35_0936

Alternate gene names: 170679655

Gene position: 954061-953723 (Counterclockwise)

Preceding gene: 170681275

Following gene: 170681859

Centisome position: 18.82

GC content: 49.56

Gene sequence:

>339_bases
ATGACCATTAAAAATAAGATGTTGCTGGGTGCGCTTTTGCTGGTTACCAGTGCCGCCTGGGCCGCACCAGCCACCGCGGG
TTCGACCAATACCTCGGGAATTTCTAAGTATGAGTTAAGCAGTTTCATTGCTGACTTTAAGCATTTCAAACCAGGTGACA
CCGTACCAGAAATGTACCGTACCGATGAGTACAACATTAAGCAGTGGCAGTTACGTAACCTGCCCGCGCCTGATGCCGGG
ACGCACTGGACCTATATGGGTGGCGCGTACGTGTTGATCAGCGACACCGACGGTAAAATCATTAAAGCCTACGACGGTGA
GATTTTTTATCATCGCTAA

Upstream 100 bases:

>100_bases
ACGAAATCATGGGATCACTAACAAAATATCGCTTGTCAGTTATATTGTATGGCAGGAAAGATATGCGACTGATATTACAG
ATCCCCAAAGTGGAGAGTTT

Downstream 100 bases:

>100_bases
AAAAAGCCCCCTCGGAGAGAGGGGGAAATGCAAACACCTTGTTATTTTTTATTATTAGCCACTTGCTCGTCTTGCTTATT
ATTAGTCGTATTTCACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAG
THWTYMGGAYVLISDTDGKIIKAYDGEIFYHR

Sequences:

>Translated_112_residues
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAG
THWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
>Mature_111_residues
TIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGT
HWTYMGGAYVLISDTDGKIIKAYDGEIFYHR

Specific function: Unknown

COG id: COG5455

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082044, Length=112, Percent_Identity=100, Blast_Score=234, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOHN_ECOL6 (P64535)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_754522.1
- EnsemblBacteria:   EBESCT00000043574
- GeneID:   1037960
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c2634
- GeneTree:   EBGT00050000010471
- HOGENOM:   HBG641901
- OMA:   NEDAFAT
- ProtClustDB:   CLSK2517911

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12466; Mature: 12335

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYR
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHC
TDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
CCCCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEEECCEEEEEC
>Mature Secondary Structure 
TIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIADFKHFKPGDTVPEMYR
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHC
TDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIKAYDGEIFYHR
CCCCCCCEEEECCCCCCCCCCCEEECCCEEEEEECCCCCEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157