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The map label for this gene is ybhK [C]

Identifier: 170079450

GI number: 170079450

Start: 2997356

End: 2998774

Strand: Reverse

Name: ybhK [C]

Synonym: SYNPCC7002_A2865

Alternate gene names: 170079450

Gene position: 2998774-2997356 (Counterclockwise)

Preceding gene: 170079455

Following gene: 170079449

Centisome position: 99.69

GC content: 54.4

Gene sequence:

>1419_bases
ATGCTGATCAACCCATTTCGTCGTCCTTTCCGCAAAAACCTCCGGGCTTATCCACGACCAATGGCAGTCACTAAAAATCA
CCCACAATATCGCCTCAACCATTGGCTCAAATGGATGATGCCAGGCCTCTCGGTCAAGCGATGGCTCTTGATGAGTGCTT
TGGGGGTTCTATTTACGGCGTTGGGGTTGGCGATTTGGCTCAATTTAACCCCCGTCTCCCGGCTGTTGGCCTTGATGGGC
GCACTCCTGCAATGGTTAACGGCAGTAGTACCGAGTAATATTTCTGGGCCGGTGGCGATCGCCGCTGGTCTAAGCCTGAT
CTTCTGGGGCCAAAATCGTACCTTTGGGGCGATTACCACGGTACTAAATCCCGATGGGGACGAAGAATTAGTTGATATGC
TCCACAACCACCGGCGCTTAAATAAAGGGCCAAAAATTGTCGCCATTGGTGGGGGAACGGGCCTCTCTACCCTGTTGCGG
GGCCTCAAAAAATACAGCAGCAACATTACCGCCGTGGTGACTGTGGCCGACGATGGTGGTTCTTCGGGGCGACTGCGCCG
GGAAATCGGTGTCCTGCCACCGGGGGATATCCGCAACTGTCTCGCAGCCTTTGCGGACGAAGAAAGACTCCTCACGGAAT
TATTTCAATATCGTTTTAAGGCTGGCGATGGGTTGGTGGGCCATAGTTTTGGTAATTTATTTCTCACGGCCATGAGCGAA
ATTACCGGGGATCTCGAACAGGCAGTGCTGGCCAGTTCCAAGGTTTTAGCCATCCGGGGCCGGGTTTTGCCAGCGACCCT
CAGTGATGTGAAGCTTTGGGCGAGGATGGCCGATGGCCGAGTTATAGAAGGAGAATCTAATATTCCAGAGGCTGGGGGAC
ACATTATGGAGTTGGGTTGTTGGCCCGAAAATCCGCCAGCCCTCCCCGCAGCAGTCAAGGCCATTGAAGAAGCCGACTTT
ATTATCATGGGGCCGGGGAGCCTCTATACAAGCGTGATCCCCAATTTGTTAGTCCCGGAAATTCGTGAGGCGATCGCCCG
TAGTGGTGCCCCCCGGATTTATGTCTGCAATATCATGACCCAACCGGGGGAAACCGATGGTTATACCGTCGCTGACCACA
TCAAGGCCATTGACCGCGCCTGTGGCAAAAAACTCTTTGATGCTGTCCTTGTCCACCAGCGATCGCCGTCGGAAGCGGCC
CTCCGTAAATATGCCCTCGAACGTTCCCATCCTGTATTTCTCGACCGCGAAGAAGTGGGGCGACTGAGGCGACGGGTGGT
GATTGCCAACATCATGGACGAAGACCCAGACACAGGCTATGTCCGCCACAACCACGAACGCCTAGCGGGGATGTTGGTGC
GTTGGTTTAGCCGTGCTGCCGAAGTCCAAACCAAAATGGCCTATCCCCCCACTAAATAG

Upstream 100 bases:

>100_bases
AAGGGGTTCTTTTCCTGTTTGATCTTGGGGTGTTCTTTTTTTTAACAACCCTAAGCGATGCTCCCCCTGGGGTGACTCTG
CTGTTCAACGATGCACCATT

Downstream 100 bases:

>100_bases
ATCCTTCCCTAGGGAAGGTGGCCGCTAGGCCGGAGGGTGTTCTCCCCTGGAGGCTACTGTGTACACACAAGTAGGGTGAA
CTAAAATGGAGGAGTCGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MLINPFRRPFRKNLRAYPRPMAVTKNHPQYRLNHWLKWMMPGLSVKRWLLMSALGVLFTALGLAIWLNLTPVSRLLALMG
ALLQWLTAVVPSNISGPVAIAAGLSLIFWGQNRTFGAITTVLNPDGDEELVDMLHNHRRLNKGPKIVAIGGGTGLSTLLR
GLKKYSSNITAVVTVADDGGSSGRLRREIGVLPPGDIRNCLAAFADEERLLTELFQYRFKAGDGLVGHSFGNLFLTAMSE
ITGDLEQAVLASSKVLAIRGRVLPATLSDVKLWARMADGRVIEGESNIPEAGGHIMELGCWPENPPALPAAVKAIEEADF
IIMGPGSLYTSVIPNLLVPEIREAIARSGAPRIYVCNIMTQPGETDGYTVADHIKAIDRACGKKLFDAVLVHQRSPSEAA
LRKYALERSHPVFLDREEVGRLRRRVVIANIMDEDPDTGYVRHNHERLAGMLVRWFSRAAEVQTKMAYPPTK

Sequences:

>Translated_472_residues
MLINPFRRPFRKNLRAYPRPMAVTKNHPQYRLNHWLKWMMPGLSVKRWLLMSALGVLFTALGLAIWLNLTPVSRLLALMG
ALLQWLTAVVPSNISGPVAIAAGLSLIFWGQNRTFGAITTVLNPDGDEELVDMLHNHRRLNKGPKIVAIGGGTGLSTLLR
GLKKYSSNITAVVTVADDGGSSGRLRREIGVLPPGDIRNCLAAFADEERLLTELFQYRFKAGDGLVGHSFGNLFLTAMSE
ITGDLEQAVLASSKVLAIRGRVLPATLSDVKLWARMADGRVIEGESNIPEAGGHIMELGCWPENPPALPAAVKAIEEADF
IIMGPGSLYTSVIPNLLVPEIREAIARSGAPRIYVCNIMTQPGETDGYTVADHIKAIDRACGKKLFDAVLVHQRSPSEAA
LRKYALERSHPVFLDREEVGRLRRRVVIANIMDEDPDTGYVRHNHERLAGMLVRWFSRAAEVQTKMAYPPTK
>Mature_472_residues
MLINPFRRPFRKNLRAYPRPMAVTKNHPQYRLNHWLKWMMPGLSVKRWLLMSALGVLFTALGLAIWLNLTPVSRLLALMG
ALLQWLTAVVPSNISGPVAIAAGLSLIFWGQNRTFGAITTVLNPDGDEELVDMLHNHRRLNKGPKIVAIGGGTGLSTLLR
GLKKYSSNITAVVTVADDGGSSGRLRREIGVLPPGDIRNCLAAFADEERLLTELFQYRFKAGDGLVGHSFGNLFLTAMSE
ITGDLEQAVLASSKVLAIRGRVLPATLSDVKLWARMADGRVIEGESNIPEAGGHIMELGCWPENPPALPAAVKAIEEADF
IIMGPGSLYTSVIPNLLVPEIREAIARSGAPRIYVCNIMTQPGETDGYTVADHIKAIDRACGKKLFDAVLVHQRSPSEAA
LRKYALERSHPVFLDREEVGRLRRRVVIANIMDEDPDTGYVRHNHERLAGMLVRWFSRAAEVQTKMAYPPTK

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=258, Percent_Identity=37.2093023255814, Blast_Score=150, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 51983; Mature: 51983

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLINPFRRPFRKNLRAYPRPMAVTKNHPQYRLNHWLKWMMPGLSVKRWLLMSALGVLFTA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LGLAIWLNLTPVSRLLALMGALLQWLTAVVPSNISGPVAIAAGLSLIFWGQNRTFGAITT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCEEEEE
VLNPDGDEELVDMLHNHRRLNKGPKIVAIGGGTGLSTLLRGLKKYSSNITAVVTVADDGG
EECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCC
SSGRLRREIGVLPPGDIRNCLAAFADEERLLTELFQYRFKAGDGLVGHSFGNLFLTAMSE
CCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ITGDLEQAVLASSKVLAIRGRVLPATLSDVKLWARMADGRVIEGESNIPEAGGHIMELGC
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECC
WPENPPALPAAVKAIEEADFIIMGPGSLYTSVIPNLLVPEIREAIARSGAPRIYVCNIMT
CCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
QPGETDGYTVADHIKAIDRACGKKLFDAVLVHQRSPSEAALRKYALERSHPVFLDREEVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECHHHHH
RLRRRVVIANIMDEDPDTGYVRHNHERLAGMLVRWFSRAAEVQTKMAYPPTK
HHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLINPFRRPFRKNLRAYPRPMAVTKNHPQYRLNHWLKWMMPGLSVKRWLLMSALGVLFTA
CCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LGLAIWLNLTPVSRLLALMGALLQWLTAVVPSNISGPVAIAAGLSLIFWGQNRTFGAITT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCEEEEE
VLNPDGDEELVDMLHNHRRLNKGPKIVAIGGGTGLSTLLRGLKKYSSNITAVVTVADDGG
EECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCC
SSGRLRREIGVLPPGDIRNCLAAFADEERLLTELFQYRFKAGDGLVGHSFGNLFLTAMSE
CCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ITGDLEQAVLASSKVLAIRGRVLPATLSDVKLWARMADGRVIEGESNIPEAGGHIMELGC
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECC
WPENPPALPAAVKAIEEADFIIMGPGSLYTSVIPNLLVPEIREAIARSGAPRIYVCNIMT
CCCCCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
QPGETDGYTVADHIKAIDRACGKKLFDAVLVHQRSPSEAALRKYALERSHPVFLDREEVG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEECHHHHH
RLRRRVVIANIMDEDPDTGYVRHNHERLAGMLVRWFSRAAEVQTKMAYPPTK
HHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]