Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079444

Identifier: 170079444

GI number: 170079444

Start: 2989586

End: 2990707

Strand: Reverse

Name: 170079444

Synonym: SYNPCC7002_A2859

Alternate gene names: NA

Gene position: 2990707-2989586 (Counterclockwise)

Preceding gene: 170079449

Following gene: 170079435

Centisome position: 99.42

GC content: 52.76

Gene sequence:

>1122_bases
ATGGTAAAGATGTTTCAATTCAAACGAACGTTATCGGTAGGGGCGATCGCCACTAGCCTAACCATGATCACCGGGGGAGT
TTGGGCGGCAGAAAAACCCACGATCCAAATTGCGATTTTGCTGGATTCTAGCAATAGTATGGATGGCCTCATTGACCAGA
CCCGACGCCAGTTGTGGACGGTGGTCAATGCCCTAACAGATGTGCGCAAAGATGGCGAGATCCCCGACCTAGAGGTGGCC
CTGTACCACTATGGCAATGATTCTTTACCCCCCGACGAAGGCTTTAACCGTCAACTGACAGATTTCACGACGGAACTGGA
TGGAGTCTCAGAGGCATTATTTACGATCCGCACCAATGGCGGCCAGGAATATAGCGGCTGGGTGATCCAAGATGCCATTA
ACCAACTCAATTGGGATAGCGACCCCGAAGACTTTCGGACAATTTTTATTGCGGGGAATGAACCCTTTGATCAAGGGAGT
GTGAACTGGGCCGAGGCGGTGAATCTCGCCAAAAATCAAGATGTGCTGGTCAATACGATCTACTGCGGCAATGCCGAAAG
TCGCGAGCGGGATCTGTGGGCTGCTGGGGCCGAATTAGGGGATGGGGCCAACTTTAACATCGACCAAAATCGCGCTGTGG
TGATTCAACCCTCTCCCTATGACGCTGAAATTCGTCGCCTAAACGATGAACTAAACCAAACTTATCTGCCCTACGGCAGC
CTGGGTGAGCAGGGCTTAGAGCGACAATTGGTACAGGATGCGAACGCTGGGGCCGCCATTGTGACGCGGGGAATCTCAAA
AAGCTCTGCCTACTACCGCAATAGTTCTTGGGATCTTGTCGATGCGATCGCCGAAGCAGAAGTAAGCCTTGAAACCCTCG
CAGAAACGGCCCTCCCAGAGGAATTGCAGGGTCTTAGTCTGGCAGAACAAGAAGCCTACATCGCCAATACCCAAGCAGAA
CGCGAACAAATTCAGGCCCAAATTCGTGACCTGACGGCCCAACGGGAAGCCTATCTCAGCAGTTTGCCCACCGATGAAGA
CGCCAAAGACACCCTCGACTACGTGATGATCCAAGCCCTACGGAGTCAACTGGCGCGCAAGGGATTTGTCCTCCCCCGCT
AA

Upstream 100 bases:

>100_bases
ACACAATTACGGTTCGCTCCCATTAGTGGGTGACATTGAACAAAAGGAGGGATTTTTACGTCAGGGAAAAATAAACGTTT
TCTATGACATTCGAGGGGAG

Downstream 100 bases:

>100_bases
ACTGACGGAGCGCATTAATCATCTCCCAGCACTTTTGGGTGCAGCTAGCCTACGCTAACGAATCAAAAAATTTCGCTATT
TTTTAGGTCTGCCACATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWTVVNALTDVRKDGEIPDLEVA
LYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNGGQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGS
VNWAEAVNLAKNQDVLVNTIYCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS
LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPEELQGLSLAEQEAYIANTQAE
REQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQALRSQLARKGFVLPR

Sequences:

>Translated_373_residues
MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWTVVNALTDVRKDGEIPDLEVA
LYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNGGQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGS
VNWAEAVNLAKNQDVLVNTIYCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS
LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPEELQGLSLAEQEAYIANTQAE
REQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQALRSQLARKGFVLPR
>Mature_373_residues
MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWTVVNALTDVRKDGEIPDLEVA
LYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNGGQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGS
VNWAEAVNLAKNQDVLVNTIYCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS
LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPEELQGLSLAEQEAYIANTQAE
REQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQALRSQLARKGFVLPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41325; Mature: 41325

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWT
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
VVNALTDVRKDGEIPDLEVALYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNG
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCC
GQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGSVNWAEAVNLAKNQDVLVNTI
CCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEE
YCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS
EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEECCCCC
LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPE
CCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCHH
ELQGLSLAEQEAYIANTQAEREQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQAL
HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RSQLARKGFVLPR
HHHHHHCCCCCCC
>Mature Secondary Structure
MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWT
CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH
VVNALTDVRKDGEIPDLEVALYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNG
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCC
GQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGSVNWAEAVNLAKNQDVLVNTI
CCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEE
YCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS
EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEECCCCC
LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPE
CCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCHH
ELQGLSLAEQEAYIANTQAEREQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQAL
HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
RSQLARKGFVLPR
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA