| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079444
Identifier: 170079444
GI number: 170079444
Start: 2989586
End: 2990707
Strand: Reverse
Name: 170079444
Synonym: SYNPCC7002_A2859
Alternate gene names: NA
Gene position: 2990707-2989586 (Counterclockwise)
Preceding gene: 170079449
Following gene: 170079435
Centisome position: 99.42
GC content: 52.76
Gene sequence:
>1122_bases ATGGTAAAGATGTTTCAATTCAAACGAACGTTATCGGTAGGGGCGATCGCCACTAGCCTAACCATGATCACCGGGGGAGT TTGGGCGGCAGAAAAACCCACGATCCAAATTGCGATTTTGCTGGATTCTAGCAATAGTATGGATGGCCTCATTGACCAGA CCCGACGCCAGTTGTGGACGGTGGTCAATGCCCTAACAGATGTGCGCAAAGATGGCGAGATCCCCGACCTAGAGGTGGCC CTGTACCACTATGGCAATGATTCTTTACCCCCCGACGAAGGCTTTAACCGTCAACTGACAGATTTCACGACGGAACTGGA TGGAGTCTCAGAGGCATTATTTACGATCCGCACCAATGGCGGCCAGGAATATAGCGGCTGGGTGATCCAAGATGCCATTA ACCAACTCAATTGGGATAGCGACCCCGAAGACTTTCGGACAATTTTTATTGCGGGGAATGAACCCTTTGATCAAGGGAGT GTGAACTGGGCCGAGGCGGTGAATCTCGCCAAAAATCAAGATGTGCTGGTCAATACGATCTACTGCGGCAATGCCGAAAG TCGCGAGCGGGATCTGTGGGCTGCTGGGGCCGAATTAGGGGATGGGGCCAACTTTAACATCGACCAAAATCGCGCTGTGG TGATTCAACCCTCTCCCTATGACGCTGAAATTCGTCGCCTAAACGATGAACTAAACCAAACTTATCTGCCCTACGGCAGC CTGGGTGAGCAGGGCTTAGAGCGACAATTGGTACAGGATGCGAACGCTGGGGCCGCCATTGTGACGCGGGGAATCTCAAA AAGCTCTGCCTACTACCGCAATAGTTCTTGGGATCTTGTCGATGCGATCGCCGAAGCAGAAGTAAGCCTTGAAACCCTCG CAGAAACGGCCCTCCCAGAGGAATTGCAGGGTCTTAGTCTGGCAGAACAAGAAGCCTACATCGCCAATACCCAAGCAGAA CGCGAACAAATTCAGGCCCAAATTCGTGACCTGACGGCCCAACGGGAAGCCTATCTCAGCAGTTTGCCCACCGATGAAGA CGCCAAAGACACCCTCGACTACGTGATGATCCAAGCCCTACGGAGTCAACTGGCGCGCAAGGGATTTGTCCTCCCCCGCT AA
Upstream 100 bases:
>100_bases ACACAATTACGGTTCGCTCCCATTAGTGGGTGACATTGAACAAAAGGAGGGATTTTTACGTCAGGGAAAAATAAACGTTT TCTATGACATTCGAGGGGAG
Downstream 100 bases:
>100_bases ACTGACGGAGCGCATTAATCATCTCCCAGCACTTTTGGGTGCAGCTAGCCTACGCTAACGAATCAAAAAATTTCGCTATT TTTTAGGTCTGCCACATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWTVVNALTDVRKDGEIPDLEVA LYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNGGQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGS VNWAEAVNLAKNQDVLVNTIYCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPEELQGLSLAEQEAYIANTQAE REQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQALRSQLARKGFVLPR
Sequences:
>Translated_373_residues MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWTVVNALTDVRKDGEIPDLEVA LYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNGGQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGS VNWAEAVNLAKNQDVLVNTIYCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPEELQGLSLAEQEAYIANTQAE REQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQALRSQLARKGFVLPR >Mature_373_residues MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWTVVNALTDVRKDGEIPDLEVA LYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNGGQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGS VNWAEAVNLAKNQDVLVNTIYCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPEELQGLSLAEQEAYIANTQAE REQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQALRSQLARKGFVLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41325; Mature: 41325
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWT CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH VVNALTDVRKDGEIPDLEVALYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNG HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCC GQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGSVNWAEAVNLAKNQDVLVNTI CCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEE YCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEECCCCC LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPE CCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCHH ELQGLSLAEQEAYIANTQAEREQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQAL HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RSQLARKGFVLPR HHHHHHCCCCCCC >Mature Secondary Structure MVKMFQFKRTLSVGAIATSLTMITGGVWAAEKPTIQIAILLDSSNSMDGLIDQTRRQLWT CCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHH VVNALTDVRKDGEIPDLEVALYHYGNDSLPPDEGFNRQLTDFTTELDGVSEALFTIRTNG HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEECCC GQEYSGWVIQDAINQLNWDSDPEDFRTIFIAGNEPFDQGSVNWAEAVNLAKNQDVLVNTI CCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEE YCGNAESRERDLWAAGAELGDGANFNIDQNRAVVIQPSPYDAEIRRLNDELNQTYLPYGS EECCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCEECCCCC LGEQGLERQLVQDANAGAAIVTRGISKSSAYYRNSSWDLVDAIAEAEVSLETLAETALPE CCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCHH ELQGLSLAEQEAYIANTQAEREQIQAQIRDLTAQREAYLSSLPTDEDAKDTLDYVMIQAL HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH RSQLARKGFVLPR HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA