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The map label for this gene is desE

Identifier: 170079419

GI number: 170079419

Start: 2956689

End: 2957591

Strand: Reverse

Name: desE

Synonym: SYNPCC7002_A2833

Alternate gene names: NA

Gene position: 2957591-2956689 (Counterclockwise)

Preceding gene: 170079420

Following gene: 170079416

Centisome position: 98.32

GC content: 52.16

Gene sequence:

>903_bases
TTGACGCATTACAGCAACGTTCTTGACCCGATTCCCTCTACACCACCACAACCTAATCCCCGTCCCCGCAACTATTCTCG
ACTGACTCGCCTCAGTTATGCCACTGGCCCAGTCTGGATTATTCTTTGTCATCTCGGCATGGCGATCGCCTTTTTCACAG
GCCTCAGTTGGGGGGCTGTCCTTTGGATTGTGTTTTGGTACTGGCTGAGAATGCTCGGCACCACTGCCATCTACCACCGT
CTCCTGACCCACAAAGCCTACCAAGCTTCCCCCTGGGTGAAATGGATTGGCAGTTTTATTACTGCCTCGGCGGGGCAAAT
GGGGCCGAGTTGGTGGAAAGCCCACCACGAAGATCACCATCGGTTTAGCGATCACCCAGGCGATCCCCACAGCTCTAAGG
AGGGGTTTTGGTGGGCCCATTACCGCTGGCTCATTTCTCCCAATACCTTCCCGAAAAAATTGCCCGCTGACATTGAGCGA
GATCCAATCCTGAAACTGATTGATCGCTTCCATTTTGTACCCCTCATTGCCCTAGGCGCATTGTCCTATGGGGTCGGCGG
CCTGGAATATCTGGCCGCATTTTTTATCAGCACCACCCTCCTGTTCCATGGTGTCGCTTTCGTGAATTCCGTTTGTCACA
AATGGGGCGATCGCCCTTTCCAAACCACCGATCACAGTCGTAATAATAGTTGGGTTGCCGTCCTTGCCCTTGGGGAAGGT
TGGCACAATCTGCACCATGCCTTTGGTTGGTCGGTACGCCACGGAATCACAATTCAAAAAGGTAAGGTGAAATACCTACC
GGACTTTACCTATTCTTTTATTCGTCTCCTGGAGCGTATGGGATTAGCCAGTAAGCTAAAACAACCCACCGTTACCGATC
TACAAAACGCGGCCAATCCCTAG

Upstream 100 bases:

>100_bases
TTATTTGACCCGACCGCAAGGGATTCGGGACTCACGAGTTGTAAAGTTATGTAAAAACGCGGTTTCATAGAAGATATTCT
CAACTCGTTAGGAAAGCATT

Downstream 100 bases:

>100_bases
ATTGTTGTCCCCAAAGGGAAATATCTATTCCGGGTTCTGGCAATACCAATCAATAGTCTCCTGTAAACCCTGCCGTAAAC
CAATCGCCGCCTCGAAACCA

Product: fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Family Protein; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTHYSNVLDPIPSTPPQPNPRPRNYSRLTRLSYATGPVWIILCHLGMAIAFFTGLSWGAVLWIVFWYWLRMLGTTAIYHR
LLTHKAYQASPWVKWIGSFITASAGQMGPSWWKAHHEDHHRFSDHPGDPHSSKEGFWWAHYRWLISPNTFPKKLPADIER
DPILKLIDRFHFVPLIALGALSYGVGGLEYLAAFFISTTLLFHGVAFVNSVCHKWGDRPFQTTDHSRNNSWVAVLALGEG
WHNLHHAFGWSVRHGITIQKGKVKYLPDFTYSFIRLLERMGLASKLKQPTVTDLQNAANP

Sequences:

>Translated_300_residues
MTHYSNVLDPIPSTPPQPNPRPRNYSRLTRLSYATGPVWIILCHLGMAIAFFTGLSWGAVLWIVFWYWLRMLGTTAIYHR
LLTHKAYQASPWVKWIGSFITASAGQMGPSWWKAHHEDHHRFSDHPGDPHSSKEGFWWAHYRWLISPNTFPKKLPADIER
DPILKLIDRFHFVPLIALGALSYGVGGLEYLAAFFISTTLLFHGVAFVNSVCHKWGDRPFQTTDHSRNNSWVAVLALGEG
WHNLHHAFGWSVRHGITIQKGKVKYLPDFTYSFIRLLERMGLASKLKQPTVTDLQNAANP
>Mature_299_residues
THYSNVLDPIPSTPPQPNPRPRNYSRLTRLSYATGPVWIILCHLGMAIAFFTGLSWGAVLWIVFWYWLRMLGTTAIYHRL
LTHKAYQASPWVKWIGSFITASAGQMGPSWWKAHHEDHHRFSDHPGDPHSSKEGFWWAHYRWLISPNTFPKKLPADIERD
PILKLIDRFHFVPLIALGALSYGVGGLEYLAAFFISTTLLFHGVAFVNSVCHKWGDRPFQTTDHSRNNSWVAVLALGEGW
HNLHHAFGWSVRHGITIQKGKVKYLPDFTYSFIRLLERMGLASKLKQPTVTDLQNAANP

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=307, Percent_Identity=27.3615635179153, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI148596961, Length=249, Percent_Identity=27.3092369477912, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17561774, Length=227, Percent_Identity=27.3127753303965, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17561776, Length=261, Percent_Identity=26.4367816091954, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17540878, Length=214, Percent_Identity=28.0373831775701, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321383, Length=278, Percent_Identity=29.136690647482, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21358573, Length=244, Percent_Identity=33.6065573770492, Blast_Score=118, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24646500, Length=231, Percent_Identity=33.7662337662338, Blast_Score=113, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24646303, Length=268, Percent_Identity=30.9701492537313, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646299, Length=268, Percent_Identity=30.9701492537313, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646305, Length=268, Percent_Identity=30.9701492537313, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646301, Length=268, Percent_Identity=30.9701492537313, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646297, Length=268, Percent_Identity=30.9701492537313, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24646295, Length=254, Percent_Identity=31.1023622047244, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21358571, Length=275, Percent_Identity=29.4545454545455, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24662393, Length=258, Percent_Identity=26.3565891472868, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34347; Mature: 34216

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHYSNVLDPIPSTPPQPNPRPRNYSRLTRLSYATGPVWIILCHLGMAIAFFTGLSWGAV
CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
LWIVFWYWLRMLGTTAIYHRLLTHKAYQASPWVKWIGSFITASAGQMGPSWWKAHHEDHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RFSDHPGDPHSSKEGFWWAHYRWLISPNTFPKKLPADIERDPILKLIDRFHFVPLIALGA
CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSYGVGGLEYLAAFFISTTLLFHGVAFVNSVCHKWGDRPFQTTDHSRNNSWVAVLALGEG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
WHNLHHAFGWSVRHGITIQKGKVKYLPDFTYSFIRLLERMGLASKLKQPTVTDLQNAANP
HHHHHHHHCCHHHCCEEEECCCEEECCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHCCCC
>Mature Secondary Structure 
THYSNVLDPIPSTPPQPNPRPRNYSRLTRLSYATGPVWIILCHLGMAIAFFTGLSWGAV
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
LWIVFWYWLRMLGTTAIYHRLLTHKAYQASPWVKWIGSFITASAGQMGPSWWKAHHEDHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RFSDHPGDPHSSKEGFWWAHYRWLISPNTFPKKLPADIERDPILKLIDRFHFVPLIALGA
CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LSYGVGGLEYLAAFFISTTLLFHGVAFVNSVCHKWGDRPFQTTDHSRNNSWVAVLALGEG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCC
WHNLHHAFGWSVRHGITIQKGKVKYLPDFTYSFIRLLERMGLASKLKQPTVTDLQNAANP
HHHHHHHHCCHHHCCEEEECCCEEECCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA