| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is livK [C]
Identifier: 170079336
GI number: 170079336
Start: 2871485
End: 2872885
Strand: Reverse
Name: livK [C]
Synonym: SYNPCC7002_A2745
Alternate gene names: 170079336
Gene position: 2872885-2871485 (Counterclockwise)
Preceding gene: 170079337
Following gene: 170079334
Centisome position: 95.51
GC content: 54.89
Gene sequence:
>1401_bases ATGGCGAAAAAGAATGATACGGCGGCATTGTTGGGAGCCTTGGTGATCACCTTGGGGTTATTGGGCGCTGGTGGCTGGTG GTTTCTCCAACAAAATCAATCTCTCCAGTTGCCGACTTCCCTGGGAGATGTAATTGGCCAGGGGGAAACCGCAAATCGCC TTAGTCGAGGGGAAAGGTTACTGCTCCAAGGCGATCGCCAACCGGACAAAGAACAGGGAATTGCGGCCTATGGAACAGGA GATTTCCCGGAAGCAATTCGGCTCTTTCAAGCTTCTCTCCAGGCGAGCCCCAACGATCCTGAAACTTTGATTTATCTGAA TAACGCCAAAATCCGCCAGCAAACTGCCAATCCCCAGGCGATCGCCGTAGTGGTCTCTTTACCAGTGGATACCGATACAA GCGGCGCGAAGGAAATTTTGCGGGGTGTGGCCCAGGCCCAAAAGGAAGCCCTTGATGGGGGTCGTGGATTTTTGGTGGTA CTTGCTGATGATGATGGGGATCCGGCGATCGCCGCTGAGGTGGCCCAAGCCCTCGCGGATCAAGCGGACATTTTGGGGGT GGTGGGTCATTTTAGTAGTGATACCAGTTTGGCGGCGGCCCAAATCTATGAGGCCGAGAACCTGGTGATGATTTCCCCCA CGAGTACGGCGGTGTCCCTCTCCACGGCAGGGGATTATATTTTTCGGACGGTGCCCAGCGATCGCTTCACGGGGACAGCC CTGGCCAACTATCTTTTAGAGCGTCTGAATCAGCGGCAGGTAGTGGTGTTTTTTAACAGTACCAGTGGCTATAGTAATTC CCTCAAGGACAGCCTCACCACAGAACTCTTTACCCGTGGTGGCACCGTGGTGGCCGAGGTGGATGTGAGTCCAGGGGGAT TTAATGGTGCCCAAGCTCTCACGGACGCGAAAAATAAAGGGGTAACGGCGATCGCCCTCGTCACCGATACCCCGACCCTC AACCAAGCGCTCCAGATCATCCAGGTGAATGAAAATCAGTTGCCTATTGTCGCTGGGGATAGTCTCTACAAGCCAGAAAC CCTACAAATTGGTGGGCGCGATGCCGTGGATATGGTGGTGGCGATTCCTTGGCACATTTTGAACCATACCAATGGCACCT TTCCTCAGGTGTCCCGCGCTCTGTGGGGGGGTGATGTGAACTGGCGCACAGCCCTGAGTTACGATGCGGCGATCGCCTTG ATGACCGGGATTCAACAAAGTTCCACACCAGATCGTCAAAATCTGCAACAAACCCTCGCCAGTCCGAATTTTTCGGCGTT GGGGGCCGCCCAAACGATCCAATTCTTGCCGTCGGGCGATCGCAATCAGGCGCTGGAAATGGTGACGGTGCAACCAGGGG AACGGTCGGGCTTTGGCTATGATTTTGTCCCGGTTCCCTAG
Upstream 100 bases:
>100_bases CAAGAAGATTTATGGTTTCTTCGGCTATGAAGCAACGTTTTGAGGGAATTTTTCGGCACAATCACAGTAGAGGCATTCGG TAGTAGAGGAGAAAAAAGCC
Downstream 100 bases:
>100_bases GTAATCAAGATTGAGTAAGGCCGCTGTTCCGCCAGAATGTGGCCAATCACAACGCTGTGGGGATAGCCCTCGGCTCGCAG CGCTTGGAGACAAGCCTGGG
Product: receptor ligand binding family protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: Hydrophobic Amino Acid Uptake ABC-Transporter; Amino Acid ABC Transporter; Serine/Threonine Kinase; Tetratricopeptide Repeat Domain Protein; Branched Chain Amino Acid ABC Transporter
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MAKKNDTAALLGALVITLGLLGAGGWWFLQQNQSLQLPTSLGDVIGQGETANRLSRGERLLLQGDRQPDKEQGIAAYGTG DFPEAIRLFQASLQASPNDPETLIYLNNAKIRQQTANPQAIAVVVSLPVDTDTSGAKEILRGVAQAQKEALDGGRGFLVV LADDDGDPAIAAEVAQALADQADILGVVGHFSSDTSLAAAQIYEAENLVMISPTSTAVSLSTAGDYIFRTVPSDRFTGTA LANYLLERLNQRQVVVFFNSTSGYSNSLKDSLTTELFTRGGTVVAEVDVSPGGFNGAQALTDAKNKGVTAIALVTDTPTL NQALQIIQVNENQLPIVAGDSLYKPETLQIGGRDAVDMVVAIPWHILNHTNGTFPQVSRALWGGDVNWRTALSYDAAIAL MTGIQQSSTPDRQNLQQTLASPNFSALGAAQTIQFLPSGDRNQALEMVTVQPGERSGFGYDFVPVP
Sequences:
>Translated_466_residues MAKKNDTAALLGALVITLGLLGAGGWWFLQQNQSLQLPTSLGDVIGQGETANRLSRGERLLLQGDRQPDKEQGIAAYGTG DFPEAIRLFQASLQASPNDPETLIYLNNAKIRQQTANPQAIAVVVSLPVDTDTSGAKEILRGVAQAQKEALDGGRGFLVV LADDDGDPAIAAEVAQALADQADILGVVGHFSSDTSLAAAQIYEAENLVMISPTSTAVSLSTAGDYIFRTVPSDRFTGTA LANYLLERLNQRQVVVFFNSTSGYSNSLKDSLTTELFTRGGTVVAEVDVSPGGFNGAQALTDAKNKGVTAIALVTDTPTL NQALQIIQVNENQLPIVAGDSLYKPETLQIGGRDAVDMVVAIPWHILNHTNGTFPQVSRALWGGDVNWRTALSYDAAIAL MTGIQQSSTPDRQNLQQTLASPNFSALGAAQTIQFLPSGDRNQALEMVTVQPGERSGFGYDFVPVP >Mature_465_residues AKKNDTAALLGALVITLGLLGAGGWWFLQQNQSLQLPTSLGDVIGQGETANRLSRGERLLLQGDRQPDKEQGIAAYGTGD FPEAIRLFQASLQASPNDPETLIYLNNAKIRQQTANPQAIAVVVSLPVDTDTSGAKEILRGVAQAQKEALDGGRGFLVVL ADDDGDPAIAAEVAQALADQADILGVVGHFSSDTSLAAAQIYEAENLVMISPTSTAVSLSTAGDYIFRTVPSDRFTGTAL ANYLLERLNQRQVVVFFNSTSGYSNSLKDSLTTELFTRGGTVVAEVDVSPGGFNGAQALTDAKNKGVTAIALVTDTPTLN QALQIIQVNENQLPIVAGDSLYKPETLQIGGRDAVDMVVAIPWHILNHTNGTFPQVSRALWGGDVNWRTALSYDAAIALM TGIQQSSTPDRQNLQQTLASPNFSALGAAQTIQFLPSGDRNQALEMVTVQPGERSGFGYDFVPVP
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49411; Mature: 49280
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKNDTAALLGALVITLGLLGAGGWWFLQQNQSLQLPTSLGDVIGQGETANRLSRGERL CCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCHHHHHHHCCCCHHHHHHCCCEE LLQGDRQPDKEQGIAAYGTGDFPEAIRLFQASLQASPNDPETLIYLNNAKIRQQTANPQA EEECCCCCCHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCCCCCE IAVVVSLPVDTDTSGAKEILRGVAQAQKEALDGGRGFLVVLADDDGDPAIAAEVAQALAD EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHH QADILGVVGHFSSDTSLAAAQIYEAENLVMISPTSTAVSLSTAGDYIFRTVPSDRFTGTA HHHHHHEECCCCCCCCHHHHHEECCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCHHH LANYLLERLNQRQVVVFFNSTSGYSNSLKDSLTTELFTRGGTVVAEVDVSPGGFNGAQAL HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH TDAKNKGVTAIALVTDTPTLNQALQIIQVNENQLPIVAGDSLYKPETLQIGGRDAVDMVV HHCCCCCEEEEEEEECCCCHHHEEEEEEECCCCCCEEECCCCCCCCEEEECCCCHHHEEE AIPWHILNHTNGTFPQVSRALWGGDVNWRTALSYDAAIALMTGIQQSSTPDRQNLQQTLA EECHHEECCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHC SPNFSALGAAQTIQFLPSGDRNQALEMVTVQPGERSGFGYDFVPVP CCCCHHHCHHHHEEECCCCCCCCEEEEEEECCCCCCCCCEEECCCC >Mature Secondary Structure AKKNDTAALLGALVITLGLLGAGGWWFLQQNQSLQLPTSLGDVIGQGETANRLSRGERL CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECCHHHHHHHCCCCHHHHHHCCCEE LLQGDRQPDKEQGIAAYGTGDFPEAIRLFQASLQASPNDPETLIYLNNAKIRQQTANPQA EEECCCCCCHHCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCEEECCCCCCCE IAVVVSLPVDTDTSGAKEILRGVAQAQKEALDGGRGFLVVLADDDGDPAIAAEVAQALAD EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHH QADILGVVGHFSSDTSLAAAQIYEAENLVMISPTSTAVSLSTAGDYIFRTVPSDRFTGTA HHHHHHEECCCCCCCCHHHHHEECCCCEEEECCCCCEEEEECCCCEEEEECCCCCCCHHH LANYLLERLNQRQVVVFFNSTSGYSNSLKDSLTTELFTRGGTVVAEVDVSPGGFNGAQAL HHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH TDAKNKGVTAIALVTDTPTLNQALQIIQVNENQLPIVAGDSLYKPETLQIGGRDAVDMVV HHCCCCCEEEEEEEECCCCHHHEEEEEEECCCCCCEEECCCCCCCCEEEECCCCHHHEEE AIPWHILNHTNGTFPQVSRALWGGDVNWRTALSYDAAIALMTGIQQSSTPDRQNLQQTLA EECHHEECCCCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHC SPNFSALGAAQTIQFLPSGDRNQALEMVTVQPGERSGFGYDFVPVP CCCCHHHCHHHHEEECCCCCCCCEEEEEEECCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA