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The map label for this gene is ynaI [C]

Identifier: 170079330

GI number: 170079330

Start: 2864563

End: 2865807

Strand: Reverse

Name: ynaI [C]

Synonym: SYNPCC7002_A2738

Alternate gene names: 170079330

Gene position: 2865807-2864563 (Counterclockwise)

Preceding gene: 170079333

Following gene: 170079329

Centisome position: 95.27

GC content: 47.47

Gene sequence:

>1245_bases
TTGGAAATCAAAAAATCTTCCCTGGGGAAGATTGCTTTTACATCGTTGACCAGAAGCAGATTCTATATATTTTTGTTAAG
TTGGACGGGCATCTATGCAAAATATTCACTTTTTTTGATTTTTACGCAGCTTCAAGCATCTTTTTTTATGAATTTAGATT
TTCTTACCCGAAGTATTTTGGGGAATACCCTCGCTGCCTATGCCATGGCGATCGTCGTGCTGGTGGTGGGCTTTCTCCTG
ATCAATGGGTTCAGGGCGCTCATTCTCAGTTCACTGCGACGGTGGGCCAAAAAGACCCAAACGACCCTCGATCCGCGCAT
CACGAAAATTCTCAGTCAGTCTTTAGTGCGTCTCCTCTATGTGGGGAACGTTTTTTTGGCGATTGGGAATCTCAACTTGC
ACCCCATTTTGAACCAAGCGGTGCGGGCTTTAACGGTTATTGCCACGACGATTATTGGCATTCAGCTCATTTCCCAATTG
GCAGAATATGCGATTCGCTCCTACCTCCTGCGTAAAGGCGACATTGAGCTAGAACAGAGTTTTAGTGCGCTGATGCCCAT
TTTGCGGGCCATACTCTGGGCTATTGGTGCGGTCTTCCTCCTGGATAACCTCGGCTTTGATATCTCTGCTGTGGTCGCCA
GTCTGGGGATTGGGGGTTTGGCGATCGCCTTTGCCGCCCAGGGGATTCTAACTGATTTATTCAGTTACTTTTCCATTGTC
CTCGACCGCCCCTTTGCCCTGGGAGACTTTATCATCGTCGGTGATTTTATCGGCACTGTAGAATACATCGGTATCAAAAC
CACGAGGCTCAAGAGTCTCAGCGGCGAAGAAATCGTCATGGCCAATACCGACCTCACAGGCTCCCGGATTCGCAACTTTA
AGCACATGAAGCGGCGACGGATCGTCTTTAGTCTTGGAGTCCTGTACGAAACGCCTAAAGAAAAGTTAGAAATTATTCCG
GCCCTCATCCAGGACATCATTAGCGCTCAAGAACAGGTTAGTTTTGACCGGGCTCACTTTGCCAGCTATGGCGATTTTAG
TTTGAACTACGAAATTGTCTACTACGTTGAAAGTAGCGACTACGCCCTCTACATGGATACTCAACAGAAAATTAACCTGG
CCATCTTCGAAGCCTTTGCCCAGCGCAACATTGAATTCGCTTATCCGACAAATGTGACCTACGTCCAAGGTTTAAATGCC
GACGCAGAAAAGGCGATCGCCCCAGAAACTGCCACGAACAGTTAA

Upstream 100 bases:

>100_bases
AGATATTCATGGGTTGAGTTTGCGTGAACTGCGGCAAAAAGGGCTCAAATTATCCTAACTGATCCGCGCCGGGAGGCTGG
CGATCGCCTTTTTTAAAGAT

Downstream 100 bases:

>100_bases
TTCCTTGAAGTATTGATCACAGTGCTGCCCCCAAGTTTTAAATTTGGGGGTTTTTTCTGGCTAGATATCGCCCCCAGCCA
CAAAATTTCGTCATAATAAT

Product: mechanosensitive ion channel family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MEIKKSSLGKIAFTSLTRSRFYIFLLSWTGIYAKYSLFLIFTQLQASFFMNLDFLTRSILGNTLAAYAMAIVVLVVGFLL
INGFRALILSSLRRWAKKTQTTLDPRITKILSQSLVRLLYVGNVFLAIGNLNLHPILNQAVRALTVIATTIIGIQLISQL
AEYAIRSYLLRKGDIELEQSFSALMPILRAILWAIGAVFLLDNLGFDISAVVASLGIGGLAIAFAAQGILTDLFSYFSIV
LDRPFALGDFIIVGDFIGTVEYIGIKTTRLKSLSGEEIVMANTDLTGSRIRNFKHMKRRRIVFSLGVLYETPKEKLEIIP
ALIQDIISAQEQVSFDRAHFASYGDFSLNYEIVYYVESSDYALYMDTQQKINLAIFEAFAQRNIEFAYPTNVTYVQGLNA
DAEKAIAPETATNS

Sequences:

>Translated_414_residues
MEIKKSSLGKIAFTSLTRSRFYIFLLSWTGIYAKYSLFLIFTQLQASFFMNLDFLTRSILGNTLAAYAMAIVVLVVGFLL
INGFRALILSSLRRWAKKTQTTLDPRITKILSQSLVRLLYVGNVFLAIGNLNLHPILNQAVRALTVIATTIIGIQLISQL
AEYAIRSYLLRKGDIELEQSFSALMPILRAILWAIGAVFLLDNLGFDISAVVASLGIGGLAIAFAAQGILTDLFSYFSIV
LDRPFALGDFIIVGDFIGTVEYIGIKTTRLKSLSGEEIVMANTDLTGSRIRNFKHMKRRRIVFSLGVLYETPKEKLEIIP
ALIQDIISAQEQVSFDRAHFASYGDFSLNYEIVYYVESSDYALYMDTQQKINLAIFEAFAQRNIEFAYPTNVTYVQGLNA
DAEKAIAPETATNS
>Mature_414_residues
MEIKKSSLGKIAFTSLTRSRFYIFLLSWTGIYAKYSLFLIFTQLQASFFMNLDFLTRSILGNTLAAYAMAIVVLVVGFLL
INGFRALILSSLRRWAKKTQTTLDPRITKILSQSLVRLLYVGNVFLAIGNLNLHPILNQAVRALTVIATTIIGIQLISQL
AEYAIRSYLLRKGDIELEQSFSALMPILRAILWAIGAVFLLDNLGFDISAVVASLGIGGLAIAFAAQGILTDLFSYFSIV
LDRPFALGDFIIVGDFIGTVEYIGIKTTRLKSLSGEEIVMANTDLTGSRIRNFKHMKRRRIVFSLGVLYETPKEKLEIIP
ALIQDIISAQEQVSFDRAHFASYGDFSLNYEIVYYVESSDYALYMDTQQKINLAIFEAFAQRNIEFAYPTNVTYVQGLNA
DAEKAIAPETATNS

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=207, Percent_Identity=25.1207729468599, Blast_Score=92, Evalue=7e-20,
Organism=Escherichia coli, GI1789291, Length=262, Percent_Identity=27.4809160305344, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786670, Length=213, Percent_Identity=26.2910798122066, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 46205; Mature: 46205

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKKSSLGKIAFTSLTRSRFYIFLLSWTGIYAKYSLFLIFTQLQASFFMNLDFLTRSIL
CCCCCCCCCCHHHHHHHHCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNTLAAYAMAIVVLVVGFLLINGFRALILSSLRRWAKKTQTTLDPRITKILSQSLVRLLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VGNVFLAIGNLNLHPILNQAVRALTVIATTIIGIQLISQLAEYAIRSYLLRKGDIELEQS
HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FSALMPILRAILWAIGAVFLLDNLGFDISAVVASLGIGGLAIAFAAQGILTDLFSYFSIV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LDRPFALGDFIIVGDFIGTVEYIGIKTTRLKSLSGEEIVMANTDLTGSRIRNFKHMKRRR
HCCCCHHCCEEEEHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
IVFSLGVLYETPKEKLEIIPALIQDIISAQEQVSFDRAHFASYGDFSLNYEIVYYVESSD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCC
YALYMDTQQKINLAIFEAFAQRNIEFAYPTNVTYVQGLNADAEKAIAPETATNS
EEEEECCHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MEIKKSSLGKIAFTSLTRSRFYIFLLSWTGIYAKYSLFLIFTQLQASFFMNLDFLTRSIL
CCCCCCCCCCHHHHHHHHCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNTLAAYAMAIVVLVVGFLLINGFRALILSSLRRWAKKTQTTLDPRITKILSQSLVRLLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VGNVFLAIGNLNLHPILNQAVRALTVIATTIIGIQLISQLAEYAIRSYLLRKGDIELEQS
HHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FSALMPILRAILWAIGAVFLLDNLGFDISAVVASLGIGGLAIAFAAQGILTDLFSYFSIV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LDRPFALGDFIIVGDFIGTVEYIGIKTTRLKSLSGEEIVMANTDLTGSRIRNFKHMKRRR
HCCCCHHCCEEEEHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHH
IVFSLGVLYETPKEKLEIIPALIQDIISAQEQVSFDRAHFASYGDFSLNYEIVYYVESSD
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCC
YALYMDTQQKINLAIFEAFAQRNIEFAYPTNVTYVQGLNADAEKAIAPETATNS
EEEEECCHHHHHHHHHHHHHHCCCEEECCCCCEEEECCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]