| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170079266
Identifier: 170079266
GI number: 170079266
Start: 2801596
End: 2802078
Strand: Reverse
Name: 170079266
Synonym: SYNPCC7002_A2673
Alternate gene names: NA
Gene position: 2802078-2801596 (Counterclockwise)
Preceding gene: 170079267
Following gene: 170079265
Centisome position: 93.15
GC content: 53.83
Gene sequence:
>483_bases ATGGCACAAGATGATTCTCTACTCCGGCGCTGGTTTCCGACTTTTGTGGGACTTTTTGAAAAACTCAAACCGCCTACGGC AGCCCCTGCCCCTACCCGTGGGGCAACCCCTGCCCCTACCCTCGTTCGGCGATCGCCTCGACCGGATGGCCCTTTTTTTC TCAAGGGGTTTGAGGAAGCAGCTTTTCTCTCCCGGGATGATCTGCTGTTAGCTCTACAGTGGAGTGCGCCGCCTTCCGAA TTGGATCAATACGCTGCCACTCTCCAAGGGGTTTCGCCGAGGCGATCGCCCGTTGTTGAAACCGAGGAATCTGATACCGA CTTTTTCATTCGGGGTCTACAGAATATCGAAACCGTCGATGGCCTCAAAAATTTAGACCTTGTCGCCCTCCTCACCTGGG AAGAGCAAGGTCAAACTCTCCGAGAAGTTGACCCCGATGACTACGACCTGCTCGACGATTTGTTAGATGTCGCCGATATT TAG
Upstream 100 bases:
>100_bases CGGCGGATATTGAAGCTCGCTTCCAGGCGCTCAAAACGGAAGCGGCACTTGATGCGGTTGGGCGCGAATAAAGCAAAGGC ACACTCCGAGGACAAATCAC
Downstream 100 bases:
>100_bases GGCGTTAGGTGGCTAAAACTCCTTGCAAAAACAGGATTATTAAAAAATAAAACAATTTACCGTCCCTTTTCGAGAAAAAC CTAGAATTTTTCCAGCGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MAQDDSLLRRWFPTFVGLFEKLKPPTAAPAPTRGATPAPTLVRRSPRPDGPFFLKGFEEAAFLSRDDLLLALQWSAPPSE LDQYAATLQGVSPRRSPVVETEESDTDFFIRGLQNIETVDGLKNLDLVALLTWEEQGQTLREVDPDDYDLLDDLLDVADI
Sequences:
>Translated_160_residues MAQDDSLLRRWFPTFVGLFEKLKPPTAAPAPTRGATPAPTLVRRSPRPDGPFFLKGFEEAAFLSRDDLLLALQWSAPPSE LDQYAATLQGVSPRRSPVVETEESDTDFFIRGLQNIETVDGLKNLDLVALLTWEEQGQTLREVDPDDYDLLDDLLDVADI >Mature_159_residues AQDDSLLRRWFPTFVGLFEKLKPPTAAPAPTRGATPAPTLVRRSPRPDGPFFLKGFEEAAFLSRDDLLLALQWSAPPSEL DQYAATLQGVSPRRSPVVETEESDTDFFIRGLQNIETVDGLKNLDLVALLTWEEQGQTLREVDPDDYDLLDDLLDVADI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17871; Mature: 17740
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDDSLLRRWFPTFVGLFEKLKPPTAAPAPTRGATPAPTLVRRSPRPDGPFFLKGFEEA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEECCHHHH AFLSRDDLLLALQWSAPPSELDQYAATLQGVSPRRSPVVETEESDTDFFIRGLQNIETVD HHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GLKNLDLVALLTWEEQGQTLREVDPDDYDLLDDLLDVADI CCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure AQDDSLLRRWFPTFVGLFEKLKPPTAAPAPTRGATPAPTLVRRSPRPDGPFFLKGFEEA CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEECCHHHH AFLSRDDLLLALQWSAPPSELDQYAATLQGVSPRRSPVVETEESDTDFFIRGLQNIETVD HHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH GLKNLDLVALLTWEEQGQTLREVDPDDYDLLDDLLDVADI CCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA