| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079264
Identifier: 170079264
GI number: 170079264
Start: 2800311
End: 2800988
Strand: Reverse
Name: 170079264
Synonym: SYNPCC7002_A2671
Alternate gene names: NA
Gene position: 2800988-2800311 (Counterclockwise)
Preceding gene: 170079265
Following gene: 170079263
Centisome position: 93.12
GC content: 48.82
Gene sequence:
>678_bases ATGACTTTGTCCCCTGTCCCTGGGAATTACTTTACCCCCCGCACCTATATTCAATGCCAACCGGAAACGGGCCTTTTAAA AACACGCCACGGGAATCGCCTTTTGGCCGTCCCAGAAGTGTTGCTCCGGAGCATCCATAAAGCCCTACGGGAAGAAACAG GTGAAGCAACCCCTTTCGCCCTCTATACCTTTGGTTTTTGGTGGGGGGGTGCTTTTTACGACCGCTTGAAAACAGAAATT GAAGCATACTACCAACGCACGATCCCCCAGATGAATGCCCTAGAATTTTTGGTGATGATGCGGCAAATTTGGGAAACCCA CGGTTTTGGGCATTTAAATTTAGATTTTACCCACCGTGATTTGGGCCTAATCAAGGTACAGGTAGAGGCCTCGATGATGC AGTTGGGTACGGAAATTGGCCTGAAACCAGAACAAACACCGTCCTATCATTTGGAAGCGGGTTTTATTGCAGCTTGGTTT TCCCGTTGGGCTGGGAAAGGCATTCGGGCCTGTGCAGTGGATTTACCGAAGGATGCGGCAACGTTAATGGCGAATCCGCC ACAATTTGCCAACTTCTTGGTGGGCTTAGGGCCAAAAATTGAACAGACGGAAATGTGGGTCAAACAAGGTCTTTCTAGCG CCGAGATTATCGAAAAATTTGCAGTGACCGATGCCTAA
Upstream 100 bases:
>100_bases GCATTATCCAAGAGGTCATCCAAGCAGAACTTCCCGCCCCATACGCCCAACTGATGCTGCCCTATCTCCAAGTCACCCAC CAATACCTGAGCGAATAACC
Downstream 100 bases:
>100_bases ATTGACGTAGGTTTTGCTAAACCCTGGGCGCTGCGGCCTAGAGCATTTCTTGGCATGATGGAAGCAAGTTCAACAAGTGT TTTGCTGACATAATAGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: 4-Vinyl Reductase 4VR
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTLSPVPGNYFTPRTYIQCQPETGLLKTRHGNRLLAVPEVLLRSIHKALREETGEATPFALYTFGFWWGGAFYDRLKTEI EAYYQRTIPQMNALEFLVMMRQIWETHGFGHLNLDFTHRDLGLIKVQVEASMMQLGTEIGLKPEQTPSYHLEAGFIAAWF SRWAGKGIRACAVDLPKDAATLMANPPQFANFLVGLGPKIEQTEMWVKQGLSSAEIIEKFAVTDA
Sequences:
>Translated_225_residues MTLSPVPGNYFTPRTYIQCQPETGLLKTRHGNRLLAVPEVLLRSIHKALREETGEATPFALYTFGFWWGGAFYDRLKTEI EAYYQRTIPQMNALEFLVMMRQIWETHGFGHLNLDFTHRDLGLIKVQVEASMMQLGTEIGLKPEQTPSYHLEAGFIAAWF SRWAGKGIRACAVDLPKDAATLMANPPQFANFLVGLGPKIEQTEMWVKQGLSSAEIIEKFAVTDA >Mature_224_residues TLSPVPGNYFTPRTYIQCQPETGLLKTRHGNRLLAVPEVLLRSIHKALREETGEATPFALYTFGFWWGGAFYDRLKTEIE AYYQRTIPQMNALEFLVMMRQIWETHGFGHLNLDFTHRDLGLIKVQVEASMMQLGTEIGLKPEQTPSYHLEAGFIAAWFS RWAGKGIRACAVDLPKDAATLMANPPQFANFLVGLGPKIEQTEMWVKQGLSSAEIIEKFAVTDA
Specific function: Unknown
COG id: COG1719
COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25425; Mature: 25293
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPVPGNYFTPRTYIQCQPETGLLKTRHGNRLLAVPEVLLRSIHKALREETGEATPFA CCCCCCCCCCCCCCCEEEECCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEE LYTFGFWWGGAFYDRLKTEIEAYYQRTIPQMNALEFLVMMRQIWETHGFGHLNLDFTHRD EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECC LGLIKVQVEASMMQLGTEIGLKPEQTPSYHLEAGFIAAWFSRWAGKGIRACAVDLPKDAA CEEEEEEEHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEECCCCHH TLMANPPQFANFLVGLGPKIEQTEMWVKQGLSSAEIIEKFAVTDA HHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure TLSPVPGNYFTPRTYIQCQPETGLLKTRHGNRLLAVPEVLLRSIHKALREETGEATPFA CCCCCCCCCCCCCCEEEECCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEE LYTFGFWWGGAFYDRLKTEIEAYYQRTIPQMNALEFLVMMRQIWETHGFGHLNLDFTHRD EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECC LGLIKVQVEASMMQLGTEIGLKPEQTPSYHLEAGFIAAWFSRWAGKGIRACAVDLPKDAA CEEEEEEEHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEECCCCHH TLMANPPQFANFLVGLGPKIEQTEMWVKQGLSSAEIIEKFAVTDA HHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA