| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is bfr [H]
Identifier: 170079257
GI number: 170079257
Start: 2794116
End: 2794580
Strand: Direct
Name: bfr [H]
Synonym: SYNPCC7002_A2663
Alternate gene names: 170079257
Gene position: 2794116-2794580 (Clockwise)
Preceding gene: 170079255
Following gene: 170079258
Centisome position: 92.89
GC content: 44.3
Gene sequence:
>465_bases ATGCAAGGAAAATCCGGCATTAACACCCAGCTTAATGCAGTTTTAAAGTCCCAGTTGACTGCAATTAACCAGTTCTTTCT CCACGCGAGAATGGCCAAGAATTGGGGCTTGGGGACATTGAATGATCAAGAATATAAGTACTCCATCAAGGCCATGAAGC AGGCCGACAGTCTTATTGAACGGATCTTGTTTTTAGAGGCCTTGCCCAACCTCCAGAGCCTTGGCAAATTGATGATTGGT GAAGATGTGCCAGAAATGTTGGCCAATGAGCTAGCGACCGCCACAACGATCCGCAATGAGTTACTAGCAGTGATTCAATT GTGTGAGACAGAACAAGATTATGTCAGTCGTGATCTTTTGGGCGAAATTCTTGAAGAAACCGAAGAACAGATCGACTGGT TTGAGTCCCAGCAGTGGCTGATCGAAAATTCTGGTTTAGAAAACTATTTACAGTCGATGATGTAG
Upstream 100 bases:
>100_bases AAGCCCCCCAATGTTGGGAACTGCCCTAAGCTAGACATACCGAAGTATTTATGACACCTTTTAGATTAAAGGTGGCCGAT TTGGAGTGAAATAAGGCGAA
Downstream 100 bases:
>100_bases ATAGGGCAAGGGTATGGGCCACGCTATGGCCATGTTTTTATTCACTTAGAGTATTGAGACAATTCCGATGAAAGGTAATC AAAACGTTTTAGAACAACTC
Product: bacterioferritin
Products: NA
Alternate protein names: BFR 2 [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MQGKSGINTQLNAVLKSQLTAINQFFLHARMAKNWGLGTLNDQEYKYSIKAMKQADSLIERILFLEALPNLQSLGKLMIG EDVPEMLANELATATTIRNELLAVIQLCETEQDYVSRDLLGEILEETEEQIDWFESQQWLIENSGLENYLQSMM
Sequences:
>Translated_154_residues MQGKSGINTQLNAVLKSQLTAINQFFLHARMAKNWGLGTLNDQEYKYSIKAMKQADSLIERILFLEALPNLQSLGKLMIG EDVPEMLANELATATTIRNELLAVIQLCETEQDYVSRDLLGEILEETEEQIDWFESQQWLIENSGLENYLQSMM >Mature_154_residues MQGKSGINTQLNAVLKSQLTAINQFFLHARMAKNWGLGTLNDQEYKYSIKAMKQADSLIERILFLEALPNLQSLGKLMIG EDVPEMLANELATATTIRNELLAVIQLCETEQDYVSRDLLGEILEETEEQIDWFESQQWLIENSGLENYLQSMM
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=152, Percent_Identity=54.6052631578947, Blast_Score=160, Evalue=4e-41,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 17573; Mature: 17573
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGKSGINTQLNAVLKSQLTAINQFFLHARMAKNWGLGTLNDQEYKYSIKAMKQADSLIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RILFLEALPNLQSLGKLMIGEDVPEMLANELATATTIRNELLAVIQLCETEQDYVSRDLL HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH GEILEETEEQIDWFESQQWLIENSGLENYLQSMM HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC >Mature Secondary Structure MQGKSGINTQLNAVLKSQLTAINQFFLHARMAKNWGLGTLNDQEYKYSIKAMKQADSLIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH RILFLEALPNLQSLGKLMIGEDVPEMLANELATATTIRNELLAVIQLCETEQDYVSRDLL HHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH GEILEETEEQIDWFESQQWLIENSGLENYLQSMM HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9409768 [H]